GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 19:30:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Gossypium bickii isolate GPG1lz chromosome 2.
CP106718.1:53460942-53460961
ATATGCAAATTCAAGCTTAAACAACCTAGA53460942AAATATCCATACAACCAATGTGCCAAACTGGCACCTCAACATCTATAATC
Virgibacillus phasianinus strain LM2416 chromosome, complete genome.
CP022315.1:2998821-2998840
TCCTACCGTAAACCTGGCAGTAGGCTATGA2998821AAATATCCATACAACCAATGAACGAATTGCTGTAGAGGATTTGGTTAAAA
Asterias rubens genome assembly, chromosome: 10.
LR699101.1:18971002-18971021
TATAGCCAAAGATAAATCACATTGTATAAA18971002AAATATCCATACAACCAATGCGTAGACTTGAGTAACAGCAAAACCCCGAA
Fragum fragum genome assembly, chromosome: 5.
OX336369.1:57888517-57888536
ATATTTTGGTGACTAAAGAAAGAGTATCAA57888517AAATATCCATACAACCAATGACTATTCTTAAAATAAAACATTGATATCAG
Clepsis dumicolana genome assembly, chromosome: 14.
OY829519.1:10365176-10365195
TATGGCAACTAGAGGCCCGTTATGTCCATT10365176AAATATCCATACAACCAATGATATTATAAGTAAAAAGATATGTCATATGC
Ailanthus altissima genome assembly, chromosome: 12.
OX327694.1:26009684-26009703
TCTTATCGAGTTGCCTAAAGGTGTAATATT26009684CATTGGTTGTATGGATATTTAAGACCAAAATGGATTCAAAAGGAATATCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAATATCCATACAACCAATG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAATATCCATACAACCAATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.103 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=AAATATCCATACAACCAATG&k=0&no_gap=0&offset=0&limit=50
0.121 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=CATTGGTTGTATGGATATTT&k=0&no_gap=0&offset=0&limit=45
0.122 | 0.001 | cgi_end;

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