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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 18:53:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Solanum melongena mRNA, clone: AE506F04, 3'end, expressed in ovary at 5d post-anthesis.
FS007059.1:323-344
ATCAGATATACCTTGTGGAAATTGAAAACC323AAATCCAATTCACAGACATTGCTGAAAAAGTGATCCAAAATCCCACAAACAA
Solanum melongena mRNA, clone: CAL01L23, 3'end, expressed in callus at 3d after subculture.
FS008441.1:324-345
ATCAAATATACCTTGTGGAAATTGAAAACC324AAATCCAATTCACAGACATTGCTGAAAAAGTGATCCAAAATCTCCACAAACA
Solanum melongena mRNA, clone: MLF05E12, 3'end, expressed in leaf at fully expanded leaf.
FS025431.1:298-319
ATCAAATATACCTTGTGGAAATTGAAAACC298AAATCCAATTCACAGACATTGCTGAAAAAGTGATCCAAAATCTCCACAAACA
Solanum melongena mRNA, clone: SmFL22D14, 3'end.
FS081144.1:341-362
ATCAGATATACCTTGTGGAAATTGAAAACC341AAATCCAATTCACAGACATTGCTGAAAAAGTGATCCAAAATCTCCACAAACA
Solanum melongena mRNA, clone: SmFL33J04, 3'end.
FS089162.1:324-345
ATCAAATATACCTTGTGGAAATTGAAAACC324AAATCCAATTCACAGACATTGCTGAAAAAGTGATCCAAAATCTCCACAAACA
Sequence 3144 from patent US 10858665.
MX131496.1:400-421
TGTTTGTGGAGATTTTGGATCACTTTTTCA400GCAATGTCTGTGAATTGGATTTGGTTTTCAATTTCCACAAGGTATATCTGAT
Sequence 3144 from patent US 11485982.
OO833881.1:400-421
TGTTTGTGGAGATTTTGGATCACTTTTTCA400GCAATGTCTGTGAATTGGATTTGGTTTTCAATTTCCACAAGGTATATCTGAT
Sequence 3144 from patent US 11512323.
OO917583.1:400-421
TGTTTGTGGAGATTTTGGATCACTTTTTCA400GCAATGTCTGTGAATTGGATTTGGTTTTCAATTTCCACAAGGTATATCTGAT
Solanum melongena mRNA, clone: AE506F04, 5'end, expressed in ovary at 5d post-anthesis.
FS007058.1:305-326
TTGTTTGTGGGATTTTGGATCACTTTTTCA305GCAATGTCTGTGAATTGGATTTGGTTTTCAATTTCCACAAGGTATATCTGAT
Solanum melongena mRNA, clone: MLF05E12, 5'end, expressed in leaf at fully expanded leaf.
FS025430.1:308-329
TGTTTGTGGAGATTTTGGATCACTTTTTCA308GCAATGTCTGTGAATTGGATTTGGTTTTCAATTTCCACAAGGTATATCTGAT
Solanum melongena mRNA, clone: SmFL22D14, 5'end.
FS081143.1:311-332
TGTTTGTGGAGATTTTGGATCACTTTTTCA311GCAATGTCTGTGAATTGGATTTGGTTTTCAATTTCCACAAGGTATATCTGAT
Solanum melongena mRNA, clone: SmFL33J04, 5'end.
FS089161.1:312-333
TGTTTGTGGAGATTTTGGATCACTTTTTCA312GCAATGTCTGTGAATTGGATTTGGTTTTCAATTTCCACAAGGTATATCTGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAATCCAATTCACAGACATTGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAATCCAATTCACAGACATTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.543 | 0.534 | search_plus_done; http://172.18.8.135:50400/match?q=AAATCCAATTCACAGACATTGC&k=0&no_gap=0&offset=0&limit=50
1.107 | 0.564 | search_minus_done; http://172.18.8.135:50400/match?q=GCAATGTCTGTGAATTGGATTT&k=0&no_gap=0&offset=0&limit=45
1.112 | 0.005 | cgi_end;

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