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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-06 02:48:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Plecotus auritus genome assembly, chromosome: X.
OY734031.1:78087860-78087879
TCCCAGATATAGGGAAGAAAAAATGCACAC78087860AAATCCCAGGAGCTCACAGAGTCCCAAGCAAAATGAACCCTAAATGACCG
Plecotus auritus genome assembly, chromosome: X.
OY734031.1:78840073-78840092
TCCCTGATATTGGGAAGAAAAAACCCACAC78840073AAATCCCAGGAGCTCACAGAGTCCCAAGCAAAATGAGCCCCAAAAGACCG
G01-071G1 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK798730.1:308-327
GAAGAAAGAAGAAAGGAAGCCACCTCAGAT308AAATCCCAGGAGCTCACAGATTGGGGTTAAGATCGTGGCTGGTTTGGCTT
G08-G08-003 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK799273.1:312-331
GAAGAAAGAAGAAAGGAAGCCACCTCAGAT312AAATCCCAGGAGCTCACAGATTGGGGTTAAGATCGTGGCTGGTTTGGCTT
F10-F10-002 Gossypium barbadense L. line Hai7124 -3 to 5 dpa fiber cDNA library Gossypium barbadense cDNA, mRNA sequence.
JK799764.1:296-315
GAAGAAAGAAGAAAGGAAGCCACCTCAGAT296AAATCCCAGGAGCTCACAGATTGGGGTTAAGATCGTGGCTGGATTGGCTT
Gossypium turneri isolate D10-2 chromosome D10_08.
CP032578.1:53577430-53577449
GAAGAAAGAAGAAAGGAAGCCACCTCAGAT53577430AAATCCCAGGAGCTCACAGATTGGGGTTAAGATCGTGGCTGGTTTGGCTT
Gossypium herbaceum isolate GPA1alz chromosome 8.
CP106698.1:117348634-117348653
GAAGAAAGAAGAAAGGAAGCCACCTCAGAT117348634AAATCCCAGGAGCTCACAGATTGGGGTTAAGATCGTGGCTGGTTTGGCTT
Gossypium rotundifolium isolate GPK201 chromosome 8.
CP106729.1:180359714-180359733
GAAGGAAGAAGAAAGGAAGCCACCTCAGAT180359714AAATCCCAGGAGCTCACAGATTGGGGTTAAGATCGTGGCTGGTTTGGCTT
Sambucus nigra genome assembly, chromosome: 5.
OX422211.1:213008449-213008468
GTTATGATATGTGAACTCACCCATTGGCTC213008449AAATCCCAGGAGCTCACAGACGTCCTCCAACATAACAGTGAACTCTCCCC
GA__Ed0027A06r Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0027A06r, mRNA sequence.
BQ410007.1:279-298
AAGCCAAACCAGCCACGATCTTAACCCCAA279TCTGTGAGCTCCTGGGATTTATCTGAGGGGGCTTCCTTTGTTCTTTCTTC
GR__Ea45O14.f GR__Ea Gossypium raimondii cDNA clone GR__Ea45O14 5', mRNA sequence.
CO081684.1:166-185
AAGCCAAACCAGCCACGATCTTAACCCCAA166TCTGTGAGCTCCTGGGATTTATCTGAGGGGGCTTCCTTTCTTCTTTCTTG
GR__Eb11C11.r GR__Eb Gossypium raimondii cDNA clone GR__Eb11C11 3', mRNA sequence.
CO126876.1:273-292
AAGCCAAACCAGCCACGATCTTAACCCCAA273TCTGTGAGCTCCTGGGATTTATCTGAGGGGGCTTCCTTTCTTCTTTCTTG
GH_HYPT_01-01-04R_F04_InvR_13Apr04_022_R Stem - 3 weeks after planting Gossypium hirsutum cDNA, mRNA sequence.
DW225140.1:226-245
AAGCCAAACCAGCCACGATCTTAACCCCAA226TCTGTGAGCTCCTGGGATTTATCTGAGGTGGCTTCCTTTCTTCTTTCTTC
Gossypium raimondii isolate D5-4 chromosome D5_08.
CP032560.1:8579759-8579778
AAGCCAAACCAGCCACGATCTTAACCCCAA8579759TCTGTGAGCTCCTGGGATTTATCTGAGGTGGCTTCCTTTCTTCTTTCTTG
Gossypium herbaceum isolate Zhongcao1 chromosome 8.
CP106683.1:11961142-11961161
AAGCCAAACCAGCCACGATCTTAACCCCAA11961142TCTGTGAGCTCCTGGGATTTATCTGAGGTGGCTTCCTTTCTTCTTTCTTC
Gossypium bickii isolate GPG1lz chromosome 8.
CP106712.1:12894714-12894733
AAGCCAAGCCAGCCACGATCTTAACCCCAA12894714TCTGTGAGCTCCTGGGATTTATCTGAGGTGGCTTCCTTTCTTCTTCCTTC
Sambucus nigra genome assembly, chromosome: 5.
OX422211.1:636074484-636074503
GGGGAGAGTTCACTGTTACGTTGGAGGAAG636074484TCTGTGAGCTCCTGGGATTTGAGCCAATGGGTGAGTTCACATATCACGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAATCCCAGGAGCTCACAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAATCCCAGGAGCTCACAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.504 | 0.495 | search_plus_done; http://172.18.8.135:50400/match?q=AAATCCCAGGAGCTCACAGA&k=0&no_gap=0&offset=0&limit=50
0.785 | 0.281 | search_minus_done; http://172.18.8.135:50400/match?q=TCTGTGAGCTCCTGGGATTT&k=0&no_gap=0&offset=0&limit=41
0.790 | 0.005 | cgi_end;

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