GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 15:05:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Coriaria nepalensis isolate Cnep1 chromosome 18.
CP114478.1:3425454-3425473
TTTTCAATAAAATAAAAATATTTAAATACA3425454AAATCGTCAAAAGGGGGAAAAAAAACACGTTTGGATATGAAGATGAGTAA
Coriaria nepalensis isolate Cnep1 chromosome 18.
CP114498.1:3426923-3426942
TTTTCAATAAAATAAAAATATTTAAATACA3426923AAATCGTCAAAAGGGGGAAAAAAAACACGTTTGGATATGAAGATGAGTAA
Volucella inanis genome assembly, chromosome: 3.
OU026154.1:46603860-46603879
CAAATTAGCCCAAATAAATTTCTCGAACTA46603860AAATCGTCAAAAGGGGGAAATGAATTGATCTTTCATTTCGTTTTCTTCTG
Heteropelma amictum genome assembly, chromosome: 1.
OY390720.1:3194366-3194385
CCCTGTATATTGAATTTTAATACATACGAT3194366AAATCGTCAAAAGGGGGAAAGATAAAAAAAAATTGACTTGGAAAAAGTGA
Aphrophora alni genome assembly, chromosome: 2.
OY740767.1:71550067-71550086
TGGAAATAGTAATAGAAGTGAATGAAAAAA71550067AAATCGTCAAAAGGGGGAAATCTTTTATAGAGGGAAAAGTTCTTTCAAAC
Rhinatrema bivittatum genome assembly, chromosome: 1.
LR584387.1:315814540-315814559
GATGCCACTTTGCCATTTTCCATGTGACTC315814540TTTCCCCCTTTTGACGATTTCTTACCCAAGTTTCATTACAATCGATATAA
TSA: Allium cepa CUDHLF2_5455 mRNA sequence.
JR848273.1:862-881
TGTTGAATTCGAATTTTAATTTGAAACTTT862TTTCCCCCTTTTGACGATTTGATAATCGTGACGAGGTTATTGGGATATTG
Lotmaria passim strain 422 isolate BRL chromosome 7.
CP140198.1:767629-767648
TGGACCGTACGTGACGATAAGGGCTTTTTT767629TTTCCCCCTTTTGACGATTTGGAGGTTTTTTCTTGTTCTCTATGGTTGCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAATCGTCAAAAGGGGGAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAATCGTCAAAAGGGGGAAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.127 | 0.118 | search_plus_done; http://172.18.8.135:50400/match?q=AAATCGTCAAAAGGGGGAAA&k=0&no_gap=0&offset=0&limit=50
0.243 | 0.116 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCCCCCTTTTGACGATTT&k=0&no_gap=0&offset=0&limit=45
0.245 | 0.002 | cgi_end;

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