GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 08:31:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Capsicum annuum Takanotsume DNA, chromosome 3, sequence.
AP026698.1:255067958-255067977
CGAAGGTTCTAATCAGAGAAAGGAGATTTA255067958AAATGGAGCATCGTGGACTCCGAGCATTTTTTACCAGCAAAATCATCCAT
KS21016O23 KS21 Capsicum annuum cDNA, mRNA sequence.
GD100715.1:379-398
ATGGATGATTTTGCTGGTAAAAAATGCTCG379GAGTCCACGATGCTCCATTTTAAATCTCCTTTCTCTGATTAGAACCTTCG
KS21030B09 KS21 Capsicum annuum cDNA, mRNA sequence.
GD101906.1:379-398
ATGGATGATTTTGCTGGTAAAAAATGCTCG379GAGTCCACGATGCTCCATTTTAAATCTCCTTTCTCTGATTAGAACCTTCG
TSA: Capsicum annuum MGMT_Contig39937 mRNA sequence.
JW090181.1:503-522
ATGGATGATTTTGCTGGTAAAAAATGCTCG503GAGTCCACGATGCTCCATTTTAAATCTCCTTTCTCTGATTAGAACCTTCG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:36233186-36233205
ATGGATGATTTTGCTGGTAAAAAATGCTCG36233186GAGTCCACGATGCTCCATTTTAAATCTCCTTTCTCTGATTAGAACCTTCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAATGGAGCATCGTGGACTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAATGGAGCATCGTGGACTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=AAATGGAGCATCGTGGACTC&k=0&no_gap=0&offset=0&limit=50
0.311 | 0.216 | search_minus_done; http://172.18.8.135:50400/match?q=GAGTCCACGATGCTCCATTT&k=0&no_gap=0&offset=0&limit=49
0.314 | 0.003 | cgi_end;

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