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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-16 08:17:35, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Cucumis melo subsp. melo EST, clone 15d_21-E06-M13R.
AM738525.2:255-274
TCCAGTTCTTGTTCCTCTTAAGAAGAAGAG255AAATTTGCCAGGAACACCAGATCCAGATGCGGAAGTAATAGCGATGTCTC
UA52DPD03 Populus tremula cambium cDNA library Populus tremula cDNA 5 prime, mRNA sequence.
BU820198.1:350-369
TCCTAATCCGGCCGTGGCCAAAAGGAAGAG350AAATTTGCCAGGAACACCAGATCCAGATGCTGAGGTTATTGCTTTATCTC
UA52DPD03.5pR Populus dormant cambium cDNA library Populus tremula cDNA clone UA52DPD03 5', mRNA sequence.
CK106055.1:344-363
TCCTAATCCGGCCGTGGCCAAAAGGAAGAG344AAATTTGCCAGGAACACCAGATCCAGATGCTGAGGTTATTGCTTTATCTC
GQ0107.B3_K03 GQ010 Populus trichocarpa x Populus deltoides cDNA clone GQ0107_K03 5', mRNA sequence.
CN520747.1:450-469
TAATCCTAATCCGGTGGCCAAAAGGAAGAG450AAATTTGCCAGGAACACCAGATCCAGATGCTGAGGTTATTGCTTTATCTC
Salix babylonica isolate Saba01F chromosome 16Ab.
CP161374.1:7447850-7447869
TAATACGAACCCGGTGGCCAAAAAGAAGAG7447850AAATTTGCCAGGAACACCAGGTTAGTAGCACGCTTAATTTCATATTTTGC
Salix babylonica isolate Saba01F chromosome 16Bb.
CP161375.1:7035144-7035163
CAATACTAACCCGGTGGTCAAAAGGAAGAG7035144AAATTTGCCAGGAACACCAGGTAAGTAGCACGCTTAATTTCATATTTTGC
Salix babylonica isolate Saba01F chromosome 16Aa.
CP161412.1:7530084-7530103
TAATACGAACCCGGTGGCCAAAAAGAAGAG7530084AAATTTGCCAGGAACACCAGGTTAGTAGCACGCTTAATTTCATATTTTGC
Salix babylonica isolate Saba01F chromosome 16Ba.
CP161413.1:6977076-6977095
CAATAATAACCCGGTGGCCAAAAAGAAGAG6977076AAATTTGCCAGGAACACCAGGTAAATAGCACGCTTAATTTCATATTTTGC
Salix dunnii isolate FNU-M-1 chromosome 16b.
CP161436.1:9259755-9259774
TAATACGAACCCGGTGGCCAAAAAGAAGAG9259755AAATTTGCCAGGAACACCAGGTAAGTAGCACGCTTAATTTCATATTTTGC
Salix dunnii isolate FNU-M-1 chromosome 16a.
CP161454.1:10210101-10210120
TAATACGAACCCGGTGGCCAAAAAGAAGAG10210101AAATTTGCCAGGAACACCAGGTAAGTAGCACGCTTAATTTCATATTTTGC
Cucumis melo genomic scaffold, unassembled_sequence38059.
LN690468.1:572-591
TCCAGTTCTTGTTCCTCTTAAGAAGAAGAG572AAATTTGCCAGGAACACCAGGCAATTAAATCCAACACC
Populus tremula genome assembly, chromosome: 14.
OZ066595.1:8416130-8416149
TCCTAATCCGGCCGTGGCCAAAAGGAAGAG8416130AAATTTGCCAGGAACACCAGGTAAGTAGCACGCTTAGCTTCATATGTTGC
Shewanella polaris strain SM1901 chromosome, complete genome.
CP041036.1:4634334-4634353
GAACTCAACAATGATCTCGACAAAACATTG4634334AAATTTGCCAGGAACACCAGTTGTCGCTTTTTTGCCGGCACTGTAAAACA
Shewanella sp. H8 chromosome, complete genome.
CP157213.1:4476440-4476459
GAACTCAACAATGATCTCGACAAAACATTG4476440AAATTTGCCAGGAACACCAGTTGTCGCTTTTTTGCCGGCACTGTAAAACA
TSA: Cucumis sativus var. sativus cultivar Vlaspik CuSa200910_1429, mRNA sequence.
JW919598.1:1261-1280
GAGACATCGCTATTACTTCCGCATCTGGAT1261CTGGTGTTCCTGGCAAATTTCTCTTCTTCTTAAGAGGAACAAGAACTGGG
Microcos paniculata chromosome 4b.
CP131450.1:34675481-34675500
GAGAAATAAAATATATAGAGAGAGACTTGC34675481CTGGTGTTCCTGGCAAATTTCTCTTCTTCTTAACTGGATTAGAAGCAGGG
Microcos paniculata chromosome 4a.
CP131459.1:38440311-38440330
GAGAAATAACATATATAGAGAGAGACTTGC38440311CTGGTGTTCCTGGCAAATTTCTCTTCTTCTTAACTGGATTAGAAGCAGGG
Cucumis melo isolate PI 511890 chromosome 12.
CP136108.1:4425061-4425080
GAGAGAGAGATTGGTGTTGGATTTAATTGC4425061CTGGTGTTCCTGGCAAATTTCTCTTCTTCTTAAGAGGAACAAGAACTGGA
Populus nigra genome assembly, chromosome: 17.
OX637688.1:7254542-7254561
GCAACATATGAAGCTAAGCGTGCTACTTAC7254542CTGGTGTTCCTGGCAAATTTCTCTTCCTTTTGGCCACCGGATTAGGATTA
Salix caprea genome assembly, chromosome: 1.
OZ037743.1:23643286-23643305
GCAAAATATGAAATTAAGCGTGCTACTTAC23643286CTGGTGTTCCTGGCAAATTTCTCTTCTTTTTGGCCACCGGGTTAGTATTG
Shewanella sp. MEBiC00475 chromosome, complete genome.
CP039928.1:2179247-2179266
TGTTTTACAGTGCCGGCAAAAAAGCGACAA2179247CTGGTGTTCCTGGCAAATTTCAATGTTTTGTCGAGATCATTGTTGAGTTC
Agonopterix subpropinquella genome assembly, chromosome: 4.
OV277697.1:24969892-24969911
AAAGGTTACAAAGGTAACCTTCTGGCAACA24969892CTGGTGTTCCTGGCAAATTTTGGGTTGCCGTATTTAAAATCCGAAATGGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAATTTGCCAGGAACACCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAATTTGCCAGGAACACCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.317 | 0.308 | search_plus_done; http://172.18.8.135:50800/match?q=AAATTTGCCAGGAACACCAG&k=0&no_gap=0&offset=0&limit=50
0.474 | 0.157 | search_minus_done; http://172.18.8.135:50800/match?q=CTGGTGTTCCTGGCAAATTT&k=0&no_gap=0&offset=0&limit=36
0.479 | 0.005 | cgi_end;

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