GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-13 09:16:18, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Micromys minutus genome assembly, chromosome: 9.
OZ004789.1:31643463-31643482
TCCAATGCCAGGATAGAGCAAATCTTGTTT31643463AACAACGGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Bos taurus genome assembly, chromosome: 6.
LR962889.1:75259507-75259526
TTAAGTCTGATGAACAATGGCAGTGTGATC75259507AACAACGGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTCTGT
Gymnoscopelus braueri genome assembly, chromosome: 16.
OY725523.1:29430540-29430559
AAGAATGCTGTGAGAGTGACATGGCTTACT29430540AACAACGGCAGTGTGTGTGTGTGGGGGGGAGCTTCTCAACTCAGAATCAC
Microchirus variegatus genome assembly, chromosome: 20.
OY735193.1:5616554-5616573
TCACACCCACTGCTTTCAGGGAGACGGCAG5616554AACAACGGCAGTGTGTGTGTGTGTGTATGCGTGTGTGTGTGTTTTAGTCA
Arachis hypogaea DNA, clone: AHGS41O16.
DH961661.1:28-47
CTCCGTCGGTGGCCATGGTGAGCGCTG28AACAACGGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Bos taurus clone CH240-97H5, WORKING DRAFT SEQUENCE, 2 unordered pieces.
AC160726.3:4339-4358
TTAAGTCTGATGAACAACGGCAGTGTGATC4339AACAACGGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGT
BMS1242 cow Bos taurus STS genomic, sequence tagged site.
G18641.1:93-112
TTAAGTCTGATGAACAACGGCAGTGTGATC93AACAACGGCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGT
Bos taurus genome assembly, chromosome: 6.
LR962764.1:42790297-42790316
AGACACACACACACACACACACACACACAC42790297ACACACACACTGCCGTTGTTGATCACACTGCCGTTGTTCATCAGACTTAA
Cervus elaphus genome assembly, chromosome: 17.
OU343094.1:42589520-42589539
GTTCAAAATCACTCACACACACACACACAC42589520ACACACACACTGCCGTTGTTGAGCTACTTCATCAGACTTAACCCAAGTGA
Bos gaurus x Bos taurus genome assembly, chromosome: 6.
OX258960.1:43552701-43552720
ACACAGACACAGACACACACACACACACAC43552701ACACACACACTGCCGTTGTTGATCACACTGCCGTTGTTCATCAGACTTAA
Bos taurus strain mammals genome assembly, chromosome: 6.
OX344695.1:43572337-43572356
AGACACAGACACACACACACACACACACAC43572337ACACACACACTGCCGTTGTTGATCACACTGCCGTTGTTCATCAGACTTAA
Bos taurus genome assembly, chromosome: Bta06.
OY997234.1:43552996-43553015
ACTCACACAGACACAGACACACACACACAC43552996ACACACACACTGCCGTTGTTGATCACACTGCCGTTGTTCATCAGACTTAA
Zeus faber genome assembly, chromosome: 13.
OY482857.1:11325341-11325360
AGACACACACACACACACACACACACACAG11325341ACACACACACTGCCGTTGTTATTTCCAGTCCCTGAGCACAACTATTCCGG
Gymnoscopelus microlampas genome assembly, chromosome: 16.
OY732718.1:20026327-20026346
CCCCCCACACACACACACACACACACACAC20026327ACACACACACTGCCGTTGTTAGTAAGCCATGTCACTCTCACAGCATTCTT
Nannobrachium achirus genome assembly, chromosome: 9.
OY997646.1:33036033-33036052
AGCCTATTTTAACTGACGTCGTTTGAGGTT33036033ACACACACACTGCCGTTGTTTTGCGGTTGTTATGCAAATAGGCTATAGAA
Arachis hypogaea cultivar Shitouqi chromosome A06.
CP030988.1:107550658-107550677
ACACACACACACACACACACACACACACAC107550658ACACACACACTGCCGTTGTTCAGCGCTCACCATGGCCACCGACGGAGCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AACAACGGCAGTGTGTGTGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AACAACGGCAGTGTGTGTGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.141 | 0.132 | search_plus_done; http://172.18.8.135:50400/match?q=AACAACGGCAGTGTGTGTGT&k=0&no_gap=0&offset=0&limit=50
0.186 | 0.044 | search_minus_done; http://172.18.8.135:50400/match?q=ACACACACACTGCCGTTGTT&k=0&no_gap=0&offset=0&limit=43
0.191 | 0.006 | cgi_end;

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