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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-04 02:50:06, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 134 unordered pieces.
FJ789657.1:172312-172333
CCTTGAATATACCACCAGAAATATGTTTAC172312AACACTTGCAACTTCATTTTCCTTTTTATTGAGCTAACTATTNNNNNNNNNN
Brassica napus cultivar Xiang5A chromosome 1.
CP123876.1:30038355-30038376
CCTTGAATATACCACCAGAAATGTATTTAC30038355AACACTTGCAACTTCATTTTCCTTTTTATTGATCAAGCTATGAAGAGAGAGA
Brassica napus cultivar Xiang5A chromosome 18.
CP123893.1:23801538-23801559
CCTTGAATATACCACCAGAAATATATTTAC23801538AACACTTGCAACTTCATTTTCCTTTTTATTGAGCTAACTATGAAGAGAGAGA
Brassica napus cultivar Xiang5A chromosome 2.
CP151897.1:28792840-28792861
CCTTGAATATACCACCAGAAATGTATTTAC28792840AACACTTGCAACTTCATTTTCCTTTTTATTGATCAAGCTATGAAGAGAGAGA
Brassica napus genome assembly, chromosome: A02.
HG994356.1:24423771-24423792
CCTTGAATATACCACCAGAAATGTATTTAC24423771AACACTTGCAACTTCATTTTCCTTTTTATTGATCAAGCTATGAAGAGAGAGA
Brassica oleracea HDEM genome, scaffold: C4.
LR031873.1:60440424-60440445
CCTTGAATATACCACCAGAAATGTATTTAC60440424AACACTTGCAACTTCATTTTCCTTTTTATTGAGCAAGCTCTGAAGAGAGAGA
Brassica oleracea var. botrytis genome assembly, chromosome: 4.
OZ282429.1:62835200-62835221
CCTTGAATATACCACCAGAAATGTATTTAC62835200AACACTTGCAACTTCATTTTCCTTTTTATTGAGCAAGCTCTGAAGAGAGAGA
Brassica rapa subsp. narinosa genome assembly, chromosome: 2.
OZ282443.1:23974136-23974157
CCTTGAATATACCACCAGAAATGTATTTAC23974136AACACTTGCAACTTCATTTTCCTTTTTATTGATCAAGCTATGAAGAGAGAGA
Brassica napus cultivar Xiang5A chromosome 10.
CP123885.1:14176997-14177018
CTCTCTCTCTAATAGTTAGCTCAATAAAAA14176997GGAAAATGAAGTTGCAAGTGTTGTAAACATATTTCTGGTGGTATATTCAAGG
Brassica napus cultivar Xiang5A chromosome 6.
CP151901.1:14176965-14176986
CTCTCTCTCTAATAGTTAGCTCAATAAAAA14176965GGAAAATGAAGTTGCAAGTGTTGTAAACATATTTCTGGTGGTATATTCAAGG
Brassica napus cultivar Xiang5A chromosome 13.
CP151908.1:55402727-55402748
TCTCTCTCTTCATAGTTAGCTCAATAAAAA55402727GGAAAATGAAGTTGCAAGTGTTGTAAATATATTTCTGGTGGTATATTCAAGG
Brassica napus genome assembly, chromosome: A06.
HG994360.1:12729687-12729708
CTCTCTCTCTAATAGTTAGCTCAATAAAAA12729687GGAAAATGAAGTTGCAAGTGTTGTAAACATATTTCTGGTGGTATATTCAAGG
Brassica napus genome assembly, chromosome: C03.
HG994367.1:50769332-50769353
TCTCTCTCTTCATAGTTAGCTCAATAAAAA50769332GGAAAATGAAGTTGCAAGTGTTGTAAATATATTTCTGGTGGTATATTCAAGG
Brassica rapa genome, scaffold: A06.
LR031569.1:12709322-12709343
CTCTCTCTCTAATAGTTAGCTCAATAAAAA12709322GGAAAATGAAGTTGCAAGTGTTGTAAACATATTTCTGGTGGTATATTCAAGG
Brassica oleracea HDEM genome, scaffold: C3.
LR031872.1:51151074-51151095
TCTCTCTCTTCATAGTTAGCTCAATAAAAA51151074GGAAAATGAAGTTGCAAGTGTTGTAAATATATTTCTGGTGGTATATTCAAGG
Brassica rapa genome assembly, chromosome: A06.
LS974622.2:13558283-13558304
CTCTCTCTCTAATAGTTAGCTCAATAAAAA13558283GGAAAATGAAGTTGCAAGTGTTGTAAACATATTTCTGGTGGTATATTCAAGG
Brassica oleracea genome assembly, chromosome: 3.
OZ281586.1:59281282-59281303
TCTCTCTCTTCATAGTTAGCTCAATAAAAA59281282GGAAAATGAAGTTGCAAGTGTTGTAAATATATTTCTGGTGGTATATTCAAGG
Brassica oleracea genome assembly, chromosome: 3.
OZ281596.1:62914965-62914986
TCTCTCTCTTCATAGTTAGCTCAATAAAAA62914965GGAAAATGAAGTTGCAAGTGTTGTAAATATATTTCTGGTGGTATATTCAAGG
Brassica oleracea genome assembly, chromosome: 8.
OZ281601.1:41140596-41140617
TCTCTCTCTTCATAGCTTGCTCAATAAAAG41140596GGAAAATGAAGTTGCAAGTGTTGTAAATACATTTCTGGTGGTATATTCAAGG
Brassica rapa subsp. trilocularis genome assembly, chromosome: 6.
OZ282420.1:12959223-12959244
CTCTCTCTCTAATAGTTAGCTCAATAAAAA12959223GGAAAATGAAGTTGCAAGTGTTGTAAACATATTTCTGGTGGTATATTCAAGG
Brassica oleracea var. botrytis genome assembly, chromosome: 3.
OZ282428.1:52462889-52462910
TCTCTCTCTTCATAGTTAGCTCAATAAAAA52462889GGAAAATGAAGTTGCAAGTGTTGTAAATATATTTCTGGTGGTATATTCAAGG
Brassica rapa subsp. narinosa genome assembly, chromosome: 6.
OZ282447.1:12975236-12975257
CTCTCTCTCTAATAGTTAGCTCAATAAAAA12975236GGAAAATGAAGTTGCAAGTGTTGTAAACATATTTCTGGTGGTATATTCAAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACACTTGCAACTTCATTTTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACACTTGCAACTTCATTTTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.368 | 0.359 | search_plus_done; http://172.18.8.135:50900/match?q=AACACTTGCAACTTCATTTTCC&k=0&no_gap=0&offset=0&limit=50
0.774 | 0.406 | search_minus_done; http://172.18.8.135:50900/match?q=GGAAAATGAAGTTGCAAGTGTT&k=0&no_gap=0&offset=0&limit=42
0.784 | 0.009 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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