GGGenome | Results

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2025-04-06 01:47:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Lotus japonicus genomic DNA, clone: LjB16I02, BM1852.
AP009634.1:71273-71292

TTATGATCCATCCAGTTGGTTAGAGACTCC71273AACATCACATTGCGTCATCGCCTGATGTCATTATAATTACTTGACCACTC

Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:117990134-117990153

GAGTGGTCAAGTAATTATAATGACATCAGG117990134CGATGACGCAATGTGATGTTGGAGTCTCTAACCAACTGGATGGATCATAA

Anthocharis cardamines genome assembly, chromosome: 4.
FR989954.1:11585088-11585107

TTAACCTACTGTACACACAAGATAGATATG11585088CGATGACGCAATGTGATGTTTTAGAAAGTGACTAGTCTATCGTTTTCTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=AACATCACATTGCGTCATCG&k=0&no_gap=0&offset=0&limit=50
0.134 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=CGATGACGCAATGTGATGTT&k=0&no_gap=0&offset=0&limit=49
0.135 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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