GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:36:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Mouse DNA sequence from clone RP23-18D24 on chromosome 2.
AL806514.8:118510-118529
TATATGCATAGAGCTGATTGGGGGTCATAA118510GAAACACCCTGGCTGATGTTGGGCTCCGTCCTGATCCCCTGTCTTTCCCC
Mus musculus genome assembly, chromosome: 2.
OW971562.1:144517929-144517948
TATATGCATAGAGCTGATTGGGGGTCATAA144517929GAAACACCCTGGCTGATGTTGGGCTCCGTCCTGATCCCCTGTCTTTCCCC
Mus musculus genome assembly, chromosome: 2.
OW971595.1:144380855-144380874
TATATGCATAGAGCTGATTGGGGGTCATAA144380855GAAACACCCTGGCTGATGTTGGGCTCCGTCCTGATCCCCTGTCTTTCCCC
Mus musculus molossinus genome assembly, chromosome: 2.
OW971659.1:144337059-144337078
TATATGCATAGAGCTGATTGGGGGTCATAA144337059GAAACACCCTGGCTGATGTTGGGCTCCGTCCTGATCCCCTGTCTTTCCCC
Mus musculus genome assembly, chromosome: 2.
OW971710.1:143724620-143724639
TATATGCATAGAGCTGATTGGGGGTCATAA143724620GAAACACCCTGGCTGATGTTGGGCTCCGTCCTGATCCCCTGTCTTTCCCC
Mus musculus genome assembly, chromosome: 2.
OW971721.1:144667984-144668003
TATATGCATAGAGCTGATTGGGGGTCATAA144667984GAAACACCCTGGCTGATGTTGGGCTCCGTCCTGATCCCCTGTCTTTCCCC
Mus musculus musculus genome assembly, chromosome: 2.
OW971763.1:144359226-144359245
TATATGCATAGAGCTGATTGGGGGTCATAA144359226GAAACACCCTGGCTGATGTTGGGCTCCGTCCTGATCCCCTGTCTTTCCCC
Mus musculus genome assembly, chromosome: 2.
OW971784.1:144591051-144591070
TATATGCATAGAGCTGATTGGGGGTCATAA144591051GAAACACCCTGGCTGATGTTGGGCTCCGTCCTGATCCCCTGTCTTTCCCC
Mus musculus genome assembly, chromosome: 2.
OX389796.1:154232209-154232228
TATATGCATAGAGCTGATTGGGGGTCATAA154232209GAAACACCCTGGCTGATGTTGGGCTCCGTCCTGATCCCCTGTCTTTCCCC
Mus musculus genome assembly, chromosome: 2.
OX390146.1:146250256-146250275
TATATGCATAGAGCTGATTGGGGGTCATAA146250256GAAACACCCTGGCTGATGTTGGGCTCCGTCCTGATCCCCTGTCTTTCCCC
Mus musculus genome assembly, chromosome: 2.
OX439015.1:151451901-151451920
TATATGCATAGAGCTGATTGGGGGTCATAA151451901GAAACACCCTGGCTGATGTTGGGCTCCGTCCTGATCCCCTGTCTTTCCCC
Desulfoglaeba alkanexedens ALDC chromosome, complete genome.
CP040098.1:3175095-3175114
ACGGGCAGAAAGACTCCATCCGGCGATTGA3175095GAAACACCCTGGCTGATGTTTGCTTCTTGTTCCCAAGCTCCAGCTTGGGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AACATCAGCCAGGGTGTTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AACATCAGCCAGGGTGTTTC | format : html | download : | debug : 

0.037 | 0.037 | search_start;
0.265 | 0.228 | search_plus_done; http://172.18.8.135:50400/match?q=AACATCAGCCAGGGTGTTTC&k=0&no_gap=0&offset=0&limit=50
0.299 | 0.034 | search_minus_done; http://172.18.8.135:50400/match?q=GAAACACCCTGGCTGATGTT&k=0&no_gap=0&offset=0&limit=50
0.321 | 0.023 | cgi_end;

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