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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:41:55, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Epinephelus fuscoguttatus DNA, LG8, complete sequence.
AP022682.1:41775055-41775074
GAAAACATAGTGGGCACAAAACAGATGAAC41775055AACATCTGCCAAATGCAACAGGCCATCTTCCTCGAGACTGTGAAGAACTT
Oryzias latipes strain HSOK chromosome 5.
CP020625.1:9788057-9788076
ACAACAGGAGACCTGCTCTCCACACTCATC9788057AACATCTGCCAAATGCAACAAGCAGGGAGTGAAAAAGTAGAACTTGGCTG
Oryzias latipes strain Hd-rR chromosome 5 sequence.
CP020669.1:9070328-9070347
ACAACAGGAGACCTGCTCTCCACACTCATC9070328AACATCTGCCAAATGCAACAAGCAGGGAGTGAAAAAGTACAACTTGGCTG
Oryzias latipes strain HNI chromosome 5.
CP020783.1:8991314-8991333
ACAACAGGAGACCTGCTCTCCACACTCATC8991314AACATCTGCCAAATGCAACAAGCAGGGAGTGAAAAAGTAGAACTTGGCTG
Sciaenops ocellatus chromosome 13.
CP136878.1:25739811-25739830
GAAGACATAGTGGGCACAAAACAGATGAAC25739811AACATCTGCCAAATGCAACAGACCATCTTCCTCGAGGCTGTGAAGAACTT
Sparus aurata genome assembly, chromosome: 1.
LR537121.1:39536443-39536462
GAAGACATAGTGGACACAAAACAGATGTAC39536443AACATCTGCCAAATGCAACAGGCCATCTTCCTCGAGACTGTGAAGAACTT
Thunnus albacares genome assembly, chromosome: 20.
OU607611.1:12995390-12995409
ATTTTTCCCAGTGCAGCTAAACACCAAGCA12995390AACATCTGCCAAATGCAACAAACAGTATTTATGGACGCCAGTGAAACACT
Microchirus variegatus genome assembly, chromosome: 10.
OY735183.1:28207775-28207794
GAAGACATAGTGGACACAAAACAGATGAAC28207775AACATCTGCCAAATGCAACAGACCATCTTCCTCGAGACTGTGAAGAACTT
Eutrigla gurnardus genome assembly, chromosome: 5.
OY741268.1:361789-361808
GAAGACATAGTGTACACAAAACAGATGAAC361789AACATCTGCCAAATGCAACAGGCCATCTTCCTCAAGACTGAGAAGAACTT
Eutrigla gurnardus genome assembly, chromosome: 5.
OY741268.1:8768825-8768844
GAAGACATAGTGTACACAAAACAGATGAAC8768825AACATCTGCCAAATGCAACAGGCCATCTTCCTCAAGACTGTGAAGAACTT
Echiichthys vipera genome assembly, chromosome: 6.
OY829651.1:34352982-34353001
GAAGACATAGTGGACACAAAACAGATGTAC34352982AACATCTGCCAAATGCAACAGGCCATCTTCCTCAAGACTGTGAAGAACTT
Echiichthys vipera genome assembly, chromosome: 6.
OY829651.1:34377446-34377465
GAAGACATAGTGGACACAAAACAGATGTAC34377446AACATCTGCCAAATGCAACAGGCCATCTTCCTCAAGACTGTGAAGAACTT
Echiichthys vipera genome assembly, chromosome: 16.
OY829661.1:2716359-2716378
GAAGACATAGTGGACACAAAACAGATGTAC2716359AACATCTGCCAAATGCAACAGGCCATCTTCCTCAAGACTGTGAAGAACTT
Arachis hypogaea DNA, clone: KIAC06M09.
DH965144.1:386-405
TATAGATGCCTAAAAGATAGTTCATTTTGA386AACATCTGCCAAATGCAACATATGAATTTGACGCATCTAGAAAAAATATT
Arachis hypogaea DNA, clone: KIAC05G17.
DH966079.1:517-536
CATAGATGCCTAAAAGATAGTTTATTTTGA517AACATCTGCCAAATGCAACATATGAATTTGAAGCATCTAGGAAAAATATT
Arachis hypogaea cultivar Shitouqi chromosome A10.
CP030992.1:20869837-20869856
CATAGATGCCTAAAAGATAGTTTATTTTGA20869837AACATCTGCCAAATGCAACATATGAATTTGAAGCATCTAGGAAAAATATT
Arachis hypogaea cultivar Shitouqi chromosome B06.
CP030998.1:94571661-94571680
TATAGATGCCTAAAAGATAGTTCATTTTGA94571661AACATCTGCCAAATGCAACATATGAATTTGACGCATCTAGAAAAAATATT
Arachis ipaensis cultivar K30076 chromosome 06.
CP049897.1:93928101-93928120
TATAGATGCCTAAAAGATAGTTCATTTTGA93928101AACATCTGCCAAATGCAACATATGAATTTGACGCATCTAGAAAAAATATT
Mystacides longicornis genome assembly, chromosome: 10.
OY756430.1:19866929-19866948
ATCTATTTTGAAATAAACGATTGACATTTT19866929AACATCTGCCAAATGCAACAGTCACCTATGTAGCTACGTTTGTATTATTG
Nemapogon koenigi genome assembly, chromosome: 21.
OZ004650.1:7408911-7408930
ACTCTTAGAATTACCTGGATGGCTGCGGCT7408911AACATCTGCCAAATGCAACAAAGCTAGCTTTCGTATACAATGGACAAAAC
Erinaceus europaeus genome assembly, chromosome: 21.
OX485831.1:1186937-1186956
GAAGAGCAGTGGGGCTCTTTGTTTTGATTG1186937TGTTGCATTTGGCAGATGTTTCTCTGACCATTTAATATTTGGAGGGAGAA
Epinephelus fuscoguttatus DNA, LG18, complete sequence.
AP022692.1:2862224-2862243
TGAAGTTCTTCAGTCTCGAGGAAGATGGCC2862224TGTTGCATTTGGCAGATGTTGTTCATCTGTTTTGTGCCCACTATGTTTTC
Sphaeramia orbicularis genome assembly, chromosome: 11.
LR597468.1:2317820-2317839
AAGTTCTTCACAGTCTCGAGGAAGATGGCC2317820TGTTGCATTTGGCAGATGTTGTTCATCTGTTTTGTGCCCACTATGTCTTC
Thunnus maccoyii genome assembly, chromosome: 20.
OU343210.1:15374633-15374652
AGTGTTTCACTGGCGTCCATAAATACTGTT15374633TGTTGCATTTGGCAGATGTTTGCTTGGTGTTTAGCTGCACTGGGAAAAAT
Eutrigla gurnardus genome assembly, chromosome: 16.
OY741279.1:23886628-23886647
CTTTACTATGAAGTCTTGAGGAAGATGGCC23886628TGTTGCATTTGGCAGATGTTGTTCATCTGTTTTGTGTCCACTATATCTTC
Echiichthys vipera genome assembly, chromosome: 20.
OY829665.1:19835388-19835407
AAGTTCTTCACAGTCTTGAGGAAGATGGCC19835388TGTTGCATTTGGCAGATGTTGTACATCTGTTTTGTGTCCACTATGTCTTC
Thunnus thynnus genome assembly, chromosome: 20.
OZ004751.1:15307654-15307673
AGTGTTTCACTGGCGTCCATAAATACTGTT15307654TGTTGCATTTGGCAGATGTTTGCTTGGTGTTTAGCTGCACTGGGAAAAAT
Arachis hypogaea DNA, clone: AHGS47I01.
DH961700.1:271-290
AATATTTTTCCTAGATGCTTCAAATTCATA271TGTTGCATTTGGCAGATGTTTCAAAATAAACTATCTTTTAGGCATCTATG
Arachis hypogaea DNA, clone: AHGS40H01.
DH961845.1:575-594
AATATTTTTCCTAGATGCTTCAAATTCATA575TGTTGCATTTGGCAGATGTTTCAAAATAAACTATCTTTTAGGCATCTATG
Arachis hypogaea cultivar Shitouqi chromosome B02.
CP030994.1:96503532-96503551
AATATTTTTCCTAGATGCTTCAAATTCATA96503532TGTTGCATTTGGCAGATGTTTCAAAATAAACTATCTTTTAGGCATCTATG
Arachis ipaensis cultivar K30076 chromosome 02.
CP049893.1:95769572-95769591
AATATTTTTCCTAGATGCTTCAAATTCATA95769572TGTTGCATTTGGCAGATGTTTCAAAATAAACTATCTTTTAGGCATCTATG
Eurois occulta genome assembly, chromosome: 7.
OX465484.1:7055371-7055390
CTGTAGATCTATGGGAACGTTTAAGGGTTT7055371TGTTGCATTTGGCAGATGTTCTCTTGTTTTGATCACGTCTTGACGGCCCG
Othius punctulatus genome assembly, chromosome: 1.
OX638138.1:109981184-109981203
AAGAAACAAATTGATTTTTTTTTGAATATT109981184TGTTGCATTTGGCAGATGTTGAACAAATTTATTTCTTGTATTGAACTAAA
Othius punctulatus genome assembly, chromosome: 1.
OX638138.1:109981578-109981597
AAAGAAACAAATTCAATTTTATACAAAATT109981578TGTTGCATTTGGCAGATGTTGAACAAATTTAGTTCTAGTATTGAACTAAA
Pedicia rivosa genome assembly, chromosome: 3.
OY720153.1:45220158-45220177
ATTTCACAAAAGCACAATTATATGTTTATC45220158TGTTGCATTTGGCAGATGTTTATTTGAAAGGAATTTAGAACTAATTATTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACATCTGCCAAATGCAACA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACATCTGCCAAATGCAACA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.239 | 0.230 | search_plus_done; http://172.18.8.135:50400/match?q=AACATCTGCCAAATGCAACA&k=0&no_gap=0&offset=0&limit=50
0.431 | 0.192 | search_minus_done; http://172.18.8.135:50400/match?q=TGTTGCATTTGGCAGATGTT&k=0&no_gap=0&offset=0&limit=30
0.441 | 0.010 | cgi_end;

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