GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-15 16:38:47, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Solanum dulcamara genome assembly, chromosome: 11.
OX359262.1:45052667-45052690
AAATATGTGACTAACTGCAAAGAGTCTTGT45052667GGATCAACTGAAGAGCTGGTGGTTTTGCGCCAACTATTCTAAACCTGGCACTGT
Solanum nigrum genome assembly, chromosome: 34.
OZ176045.1:47573317-47573340
ATGTGACTAACTAGTTGCAAAGGGTCTTGT47573317GGATCAACTGAAGAGCTGGTGGTTTTGCGGCAACTATTCTAAACCTGGCACTGT
Solanum nigrum genome assembly, chromosome: 35.
OZ176046.1:44808101-44808124
ATGTGACTAACTAGTTGCAAAGGGTCTTGT44808101GGATCAACTGAAGAGCTGGTGGTTTTGCGGCAACTATTCTAAAGCTGGCACTGT
Solanum nigrum genome assembly, chromosome: 36.
OZ176047.1:42126756-42126779
ATGTGACTAACTAGTTGCAAAGGGTCTTGT42126756GGATCAACTGAAGAGCTGGTGGTTTTGCGGCAACTATTCTAAACCTGGCACTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AACCACCAGCTCTTCAGTTGATCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AACCACCAGCTCTTCAGTTGATCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.344 | 0.334 | search_plus_done; http://172.18.8.135:50800/match?q=AACCACCAGCTCTTCAGTTGATCC&k=0&no_gap=0&offset=0&limit=50
0.478 | 0.134 | search_minus_done; http://172.18.8.135:50800/match?q=GGATCAACTGAAGAGCTGGTGGTT&k=0&no_gap=0&offset=0&limit=50
0.481 | 0.003 | cgi_end;

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