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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 18:24:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Micromys minutus genome assembly, chromosome: 12.
OZ004792.1:16249885-16249904
TGACGTGGCGGAGCTCTGCCGTGCTGATGA16249885AACCACTTCCATCCTTGTCAAAGACTCGGAACGCCTCACAGATATCTTCT
Micromys minutus genome assembly, chromosome: 12.
OZ004792.1:16272855-16272874
TGACGTGGCGGAGCTCTGCCGTGCTGATGT16272855AACCACTTCCATCCTTGTCAAAGACTCGGAACGCCTCACAGATTTCTTTT
Micromys minutus genome assembly, chromosome: 12.
OZ004792.1:16298266-16298285
TGACGTGGCGGAGCTCTGCCGTGCTGATGT16298266AACCACTTCCATCCTTGTCAAAGACTCGGAACGCCTCACAGATTTCTTTT
EST290069 L. pennellii trichome, Cornell University Solanum pennellii cDNA clone cLPT1G5 similar to Vigna radiata calcium-dependent protein kinase, mRNA sequence.
AW160211.1:563-582
AAGCTTGCTGGACCTCATCAACTGTTATGT563AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
cC-esflcLEL6G13d1 Tomato flower library from a mixture of developmental stages Solanum lycopersicum cDNA clone cC-esflcLEL6G13d1, mRNA sequence.
BG631080.1:323-342
AAGCTTCTCGTAGCTCATCTAGCTCAATAT323AACCACTTCCATCCTTGTCAAAGAACATGAATGCTCTACGAAAATGCTCA
EST626609 Generation of a set of potato cDNA clones for microarray analyses mixed potato tissues Solanum tuberosum cDNA clone STMJO45 3' end, mRNA sequence.
BQ519194.1:632-651
AAGCTTCTCGTAGCTCATCTAGCTCAATAT632AACCACTTCCATCCTTGTCAAAGAACATGAATGCTCTACGAAAA
X058F08 Populus wood cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA sequence.
BU897492.1:495-514
AAGCTTGCTGAAGCTCATCGACCGTGATAT495AACCACTTCCATCCTTGTCAAAATATTGGAATGCTGCAACAAGATGTTCC
EST734402 potato callus cDNA library, normalized and full-length Solanum tuberosum cDNA clone POCBI39 3' end, mRNA sequence.
CK250765.1:626-645
AAGCTTCTCGTAGCTCATCTAGCTCAATAT626AACCACTTCCATCCTTGTCAAAGAACATGAATGCTCTACGAAAATGCTCA
LERCD04D01 Seedlings treated without 0.2mM CdCl2 Solanum lycopersicum cDNA clone LERCD04D01, mRNA sequence.
CK715267.1:252-271
AAGCTTGCTGGACCTCATCAACTGTTATGT252AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
UCRCS09_2B01_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-2B01-C2-1-4.b, mRNA sequence.
CX049867.1:694-713
ATGCTTGCTGAAGTTCATCAACCGTAATAT694AACCACTTCCATCCTTGTCAAAGTACTGGAATGCAGCAACAAGATGTTCC
90302.1 Mixed Leaf Solanum tuberosum cDNA clone 90302 5', mRNA sequence.
CX162367.1:653-672
AAGCTTCTCGTAGCTCATCTAGCTCAATAT653AACCACTTCCATCCTTGTCAAAGAACATGAATGCTCTACGAAAATGCTCA
UCRCS10_7H09_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-7H09-P17-6.b, mRNA sequence.
CX674664.1:641-660
ATGCTTGCTGAAGTTCATCAACCGTAATAT641AACCACTTCCATCCTTGTCAAAGTACTGGAATGCAGCAACAAGATGTTCC
UCRCS08_64H02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-64H02-O4-1-6.b, mRNA sequence.
CX675788.1:645-664
ATGCTTGCTGAAGTTCATCAACCGTAATAT645AACCACTTCCATCCTTGTCAAAGTACTGGAATGCAGCAACAAGATGTTCC
X058F08.5pR Populus wood cDNA library Populus tremula x Populus tremuloides cDNA clone X058F08 5', mRNA sequence.
DN503133.1:494-513
AAGCTTGCTGAAGCTCATCGACCGTGATAT494AACCACTTCCATCCTTGTCAAAATATTGGAATGCTGCAACAAGATGTTCC
UCRCS11_04N17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0004N17, mRNA sequence.
DN620110.1:585-604
TGCTTTGCTGAAGTTCATCAACCGTAATAT585AACCACTTCCATCCTTGTCAA
6083.2 After-Cooking Darkening A Solanum tuberosum cDNA clone 6083 5', mRNA sequence.
DN939404.1:499-518
AAGCTTGCTGGACCTCATCAACCGTTATGT499AACCACTTCCATCCTTGTCAAAATATTGAAATGCGGCCATGAGATGTTCC
AGN_RNC124xk09f1.ab1 AGN_RNC Nicotiana tabacum cDNA 5', mRNA sequence.
FG174121.1:670-689
AAGCTTGCTGGACCTCATCAACTGTTATAT670AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
AGN_RNC124xk09r1.ab1 AGN_RNC Nicotiana tabacum cDNA 3', mRNA sequence.
FG174193.1:591-610
AAGCTTGCTGGACCTCATCAACTGTTATAT591AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
AGN_PNL207ar1_f12.trimmed.seq AGN_PNL Nicotiana tabacum cDNA 3', mRNA sequence.
FG183734.1:534-553
AAGCTTGCTGCACCTCATCAACCGTTATAT534AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
UCRVU07_CCNP14951_g1 Cowpea UCR 779 Mixed Tissue and Conditions cDNA Library UCRVU07-1-2 Vigna unguiculata cDNA clone CCNP14951.g1, mRNA sequence.
FG882745.1:679-698
AAGCTTGTTGAAGTTCATCAACCGTAATAT679AACCACTTCCATCCTTGTCAAAATATTGGAATGCTGCAATAAGATGTTCT
Solanum melongena mRNA, clone: AE001A11, 3'end, expressed in ovary at anthesis.
FS000017.1:508-527
AAGCTTGCTGGACCTCATCAACCGTTATGT508AACCACTTCCATCCTTGTCAAAATATTGAAATGCAGCCATGAGATGTTCT
Solanum melongena mRNA, clone: SmFL09D09, 3'end.
FS072306.1:588-607
AAGCTTGCTGGACCTCATCAACCGTTATGT588AACCACTTCCATCCTTGTCAAAATATTGAAATGCAGCCATGAGATGTTCT
Solanum melongena mRNA, clone: SmFL33G02, 3'end.
FS089024.1:577-596
AAGCTTCTCGTAGTTCATCTAGCTCAATAT577AACCACTTCCATCCTTGTCAAAGAACATGAATGCTCTACGAAAATGCTCA
Solanum melongena mRNA, clone: SmFL38M15, 3'end.
FS092832.1:458-477
AAGCTTGCTGGACCTCATCAACCGTTATGT458AACCACTTCCATCCTTGTCAAAATATTGAAATGCAGCCATGAGATGTTCT
Solanum torvum mRNA, clone: TVR23J09, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS118162.1:631-650
ACGCCTGCTGGAGCTCATCAACTGTAATAT631AACCACTTCCATCCTTGTCAAAATACTGAAATG
Solanum torvum mRNA, clone: TVR29B12, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS121402.1:596-615
AAGCTTCTCGCAGTTCATCTAGCTCAATAT596AACCACTTCCATCCTTGTCAAA
Solanum torvum mRNA, clone: TVR36N24, 3'end, expressed in root at vegetative stage, 2 months after germination.
FS125856.1:351-370
ACGCCTGCTGGAGCTCATCAACTGTAATAT351AACCACTTCCATCCTTGTCAAAATACTGAAATGCAGCCATGAGATGTTCC
KS15001E12 KS15 Capsicum annuum cDNA, mRNA sequence.
GD063480.1:620-639
AAGCTTGCTGGACCTCATCAACCGTTATAT620AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
KS15004B03 KS15 Capsicum annuum cDNA, mRNA sequence.
GD063719.1:620-639
AAGCTTGCTGGACCTCATCAACCGTTATAT620AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
KS18003H06 KS18 Capsicum annuum cDNA, mRNA sequence.
GD081800.1:625-644
AAGCTTGCTGGACCTCATCAACCGTTATAT625AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
KS18019E06 KS18 Capsicum annuum cDNA, mRNA sequence.
GD083253.1:625-644
AAGCTTGCTGGACCTCATCAACCGTTATAT625AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
KS18044C08 KS18 Capsicum annuum cDNA, mRNA sequence.
GD085556.1:625-644
AAGCTTGCTGGACCTCATCAACCGTTATAT625AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
KS18049A11 KS18 Capsicum annuum cDNA, mRNA sequence.
GD085986.1:625-644
AAGCTTGCTGGACCTCATCAACCGTTATAT625AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
KS18056H08 KS18 Capsicum annuum cDNA, mRNA sequence.
GD086702.1:625-644
AAGCTTGCTGGACCTCATCAACCGTTATAT625AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
KS18057H01 KS18 Capsicum annuum cDNA, mRNA sequence.
GD086788.1:625-644
AAGCTTGCTGGACCTCATCAACCGTTATAT625AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTC
KS18060G10 KS18 Capsicum annuum cDNA, mRNA sequence.
GD087062.1:625-644
AAGCTTGCTGGACCTCATCAACCGTTATAT625AACCACTTCCATCCTTGTCAAATATTGAAATGCTGCCATGAGATGTTCCT
KS18064E11 KS18 Capsicum annuum cDNA, mRNA sequence.
GD087416.1:625-644
AAGCTTGCTGGACCTCATCAACCGTTATAT625AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
CCFS1974.g1_K13.ab1 CCF(STU) sunflower Helianthus annuus cDNA clone CCFS1974, mRNA sequence.
GE485281.1:377-396
ACGCTTGTTGGAGCTCATCAATCGTAATGT377AACCACTTCCATCCTTGTCAAAGAACGAAAACGCAGACAAAAGATTCTCT
CCFS4541.g1_J08.ab1 CCF(STU) sunflower Helianthus annuus cDNA clone CCFS4541, mRNA sequence.
GE490225.1:375-394
ACGCTTGTTGGAGCTCATCAATCGTAATGT375AACCACTTCCATCCTTGTCAAAGAACGAAAACGCAGACAAAAGATTCTCT
CCFS4573.g1_J16.ab1 CCF(STU) sunflower Helianthus annuus cDNA clone CCFS4573, mRNA sequence.
GE490293.1:378-397
ACGCTTGTTGGAGCTCATCAATCGTAATGT378AACCACTTCCATCCTTGTCAAAGAACGAAAACGCAGACAAAAGATTCTCT
CCFS5494.g1_L05.ab1 CCF(STU) sunflower Helianthus annuus cDNA clone CCFS5494, mRNA sequence.
GE492233.1:377-396
ACGCTTGTTGGAGCTCATCAATCGGAATGT377AACCACTTCCATCCTTGTCAAAGAACGAAAACGCACACAAAAGATTCTCT
CCFS5556.g1_H21.ab1 CCF(STU) sunflower Helianthus annuus cDNA clone CCFS5556, mRNA sequence.
GE492357.1:386-405
ACGCTTGTTGGAGCTCATCAATCGTAATGT386AACCACTTCCATCCTTGTCAAAGAACGAAAACGCAGACAAAAGATTCTCT
CCFS6546.g1_C05.ab1 CCF(STU) sunflower Helianthus annuus cDNA clone CCFS6546, mRNA sequence.
GE494456.1:476-495
ACGCTTGTTGGAGCTCATCAATCGTAATGT476AACCACTTCCATCCTTGTCAAAGAACTAAAACGCAGACAAAAGATTCTCT
CCFS6968.g1_O13.ab1 CCF(STU) sunflower Helianthus annuus cDNA clone CCFS6968, mRNA sequence.
GE495348.1:396-415
ACGCTTGTTGGAGCTCATCAATCGTAATGT396AACCACTTCCATCCTTGTCAAAGAACGAAAACGCAGACAAAAGATTCTCT
CCFT9844.g1_G14.ab1 CCF(STU) sunflower Helianthus annuus cDNA clone CCFT9844, mRNA sequence.
GE515306.1:369-388
ACGCTTGTTGGAGCTCATCAATCGTAATGT369AACCACTTCCATCCTTGTCAAAGAACGAAAACGCAGACAAAAGATTCTCT
CCIC20129.g1 CCIC Mimulus guttatus IM62 roots (H) Erythranthe guttata cDNA clone CCIC20129 3', mRNA sequence.
GR041401.1:575-594
AAGCTTGTTGAAGTTCATCAACTGTAATAT575AACCACTTCCATCCTTGTCAAAATATTGGAATGCTG
CCIF3455.g1 CCIF Mimulus guttatus IM62 leaves (H) Erythranthe guttata cDNA clone CCIF3455 3', mRNA sequence.
GR059517.1:595-614
AAGCTTGTTGAAGTTCATCAACTGTAATAT595AACCACTTCCATCCTTGTCAAAATATTGGGAATGCTGCCCAAAGATGTTC
LUSGE1NG-RP-165_C09_03APR2007_075 LUSGE1NG Linum usitatissimum cDNA, mRNA sequence.
JG115615.1:686-705
ATGCTTGTTGAAGCTCATCCACTGTAATAT686AACCACTTCCATCCTTGTCA
LUSTC1NG-RP-072_G05_05MAR2007_035 LUSTC1NG Linum usitatissimum cDNA, mRNA sequence.
JG236814.1:476-495
ACGCTTGCTGAAGCTCATCCACTGTGATAT476AACCACTTCCATCCTTGTCAAAATACCGGAACGCCGCAACAAGATGTTCC
TSA: Digitalis purpurea contig04163.Dipuleaves mRNA sequence.
JO463817.1:503-522
AAGCTTGTTGAAGTTCATCAACCGTAATAT503AACCACTTCCATCCTTGTCAAAATATTGGAATGCTGCCAACGAGATGCTC
TSA: Sesamum indicum Locus_19257_Transcript_2/2_Confidence_1.000_Length_5255 mRNA sequence.
JP650147.1:3360-3379
AAGCTTGTTGAAGTTCATCAACTGTAATAT3360AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCAAAAGATGTTCC
TSA: Larix kaempferi PEMC21533.Lakaproemb mRNA sequence.
JR151914.1:592-611
ATGCTTGCTGGAGTTCATCAACCGTAATAT592AACCACTTCCATCCTTGTCAAAGTACGAAAATGCAGCAAATAAATGCTCT
TSA: Pisum sativum contig06135.PisaPYK9 mRNA sequence.
JR956810.1:592-611
AAGCTTGTTGAAGTTCATCAACTGTAATAT592AACCACTTCCATCCTTGTCAAAATATCGGAATGCTGCAACAAGATGCTCC
TSA: Musa acuminata AAA Group Unigene83368_B1 mRNA sequence.
JV351672.1:306-325
AAGCTTGCTGAAGTTCGTCGACTGTAATAT306AACCACTTCCATCCTTGTCAAAGTAAGAAAATGCTGCCACTAAATGCTCT
TSA: Musa acuminata AAA Group Unigene94748_NK1 mRNA sequence.
JV427825.1:367-386
AAGCTTGCTGAAGTTCGTCGACTGTAATAT367AACCACTTCCATCCTTGTCAAAGTAAGAAAATGCTGCCACTAAATGCTCT
TSA: Capsicum annuum MGMT_Contig2594, mRNA sequence.
JW052838.1:626-645
AAGCTTGCTGGACCTCATCAACCGTTATAT626AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
TSA: Capsicum annuum CM_MegaContig_22638 mRNA sequence.
JW103289.1:830-849
ATGCCTGCTGGAGCTCATCAACTGTAATAT830AACCACTTCCATCCTTGTCAAAATACTGAAATGCTGCCATGAGATGTTCC
TSA: Capsicum annuum CMCs80_8146, mRNA sequence.
JW115420.1:666-685
AAGCTTGCTGGACCTCATCAACCGTTATAT666AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
TSA: Capsicum annuum EJ_MegaContig_1849, mRNA sequence.
JW128945.1:644-663
AAGCTTGCTGGACCTCATCAACCGTTATAT644AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
TSA: Capsicum annuum EJ_MegaContig_8682, mRNA sequence.
JW130075.1:692-711
ATGCCTGCTGGAGCTCATCAACTGTAATAT692AACCACTTCCATCCTTGTCAAAATACTGAAATGCTGCCATGAGATGTTCC
TSA: Capsicum annuum MA_MegaContig_10717, mRNA sequence.
JW157336.1:682-701
ATGCCTGCTGGAGCTCATCAACTGTAATAT682AACCACTTCCATCCTTGTCAAAATACTGAAATGCTGCCATGAGATGTTCC
TSA: Costus pictus Locus_19771_Transcript_2/2.Copileaf mRNA sequence.
JW227741.1:361-380
AAACTTGCTGAAGTTCATCTACTGTAATAT361AACCACTTCCATCCTTGTCAAAGTATTGAAAAGCTGTAATTAAATGTTCT
TSA: Costus pictus Locus_21616_Transcript_1/1.Copileaf mRNA sequence.
JW230518.1:462-481
AAGCTTGCTGAAGTTCATCAACCGTGATAT462AACCACTTCCATCCTTGTCAAAATAAGAAAATGCTGCCACAAGATGCTCT
TSA: Curcuma longa 31633_Transcript_1/1_Confidence_1.000_Length_552_45_A mRNA sequence.
JW756912.1:480-499
AAGCTTGTTGGAGCTCATCGACAGTAATAT480AACCACTTCCATCCTTGTCAAAGTATGAAAATGCTGCCATTAAATGTTCT
75966 Tomato HindIII BAC Library Solanum lycopersicum genomic clone LE_HBa0157G16 3, genomic survey sequence.
DU063130.1:27-46
GTGGCTGGACCTCATCACTGTTATGT27AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGACCTTTA
417756 Tomato HindIII BAC Library Solanum lycopersicum genomic clone LE_HBa0239K22 5, genomic survey sequence.
DU903431.1:547-566
AAGCTTCTCGTAGCTCATCTAGCTCAATAT547AACCACTTCCATCCTTGTCAAAGAACATGAATGCTCTACGAAAATGCTCA
OG_ABa0149A13.f OG_ABa Oryza meyeriana var. granulata genomic clone OG_ABa0149A13 5', genomic survey sequence.
DX121907.1:14-33
TCAACTGTGATAA14AACCACTTCCATCCTTGTCAAAGTATGTAAAGGCCGCCATCAAGTGCTCG
MG_Ba0086A20.F MG_Ba Erythranthe guttata genomic 5', genomic survey sequence.
GS430780.1:24-43
TTGAAGTTCATCAACTGTAATAT24AACCACTTCCATCCTTGTCAAAATATTGGAATGCTGCCCAAAGATGTTCC
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC M064P12, *** SEQUENCING IN PROGRESS ***, 15 unordered pieces.
AC271676.1:47176-47195
AAGCTTGTTGAAGTTCATCAACCGTAATAT47176AACCACTTCCATCCTTGTCAAAATATTGGAATGCTGCAATAAGATGTTCT
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC H030P21, *** SEQUENCING IN PROGRESS ***, 9 unordered pieces.
AC271884.1:77205-77224
AAGCTTGTTGAAGTTCATCAACCGTAATAT77205AACCACTTCCATCCTTGTCAAAATATTGGAATGCTGCAATAAGATGTTCT
Solanum lycopersicum strain Heinz 1706 chromosome 1 clone hba-9a8 map 1, complete sequence.
AC240217.1:115645-115664
AGGCCTGCTGGAGCTCATCTACTGTAATAT115645AACCACTTCCATCCTTGTCAAAATACTGAAATGCTGCCATGAGATGTTCC
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:167928223-167928242
AAGCTTGCTGGACCTCATCAACCGTTATAT167928223AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
Ipomoea triloba cultivar NCNSP0323 chromosome 8.
CP025667.1:18613264-18613283
AAGCTTGCTGGAGCTCATCAACTGTAATAT18613264AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCAACAAGATGTTCT
Linum usitatissimum chromosome Lu6.
CP027630.1:13244201-13244220
ACGCTTGCTGAAGCTCATCCACTGTGATAT13244201AACCACTTCCATCCTTGTCAAAATACCGGAACGCCGCAACAAGATGTTCC
Vigna unguiculata cultivar Xiabao 2 chromosome Vu08.
CP039351.1:48406834-48406853
AAGCTTGTTGAAGTTCATCAACCGTAATAT48406834AACCACTTCCATCCTTGTCAAAATATTGGAATGCTGCAATAAGATGTTCT
Jasminum sambac cultivar Hutoumoli linkage group Lg10.
CP073641.1:3050207-3050226
AAGCTTGCTGCAGTTCATCGATGGTAATAT3050207AACCACTTCCATCCTTGTCAAAATATTGGAATGCAGCCATAAGATGTTCC
Jasminum sambac cultivar Hutoumoli linkage group Lg5.
CP073648.1:13323162-13323181
AAGCTTGCTGGAGTTCGTCTACCGTGATAT13323162AACCACTTCCATCCTTGTCAAAATATTGGAATGCTGCTAAGAGATGTTCC
Daucus carota subsp. sativus cultivar DH1 chromosome 5.
CP093347.1:40504794-40504813
AGGCTTGTTGAAGCTCGTCTTGGGTGATAT40504794AACCACTTCCATCCTTGTCAAAATAGGAGAAAGCCGCAAAGAGATGATCC
Musa troglodytarum cultivar karat chromosome 3.
CP097505.1:16502461-16502480
AAGCTTGCTGAAGTTCGTCGACTGTAATAT16502461AACCACTTCCATCCTTGTCAAAGTAAGAAAATGCTGCCACTAAATGCTCT
Musa troglodytarum cultivar karat chromosome 4.
CP097506.1:54217005-54217024
AAGCTTGCTGAAGTTCATCAACTGTGATAT54217005AACCACTTCCATCCTTGTCAAAATATGAAAAAGCTGCCACCAAATGTTCT
Coriaria nepalensis isolate Cnep1 chromosome 12.
CP114472.1:10042921-10042940
ATGCTTGTTGAAGCTCGTCGACAGTGATGT10042921AACCACTTCCATCCTTGTCAAAGTATTGAAATGCTGCAACAAGATGCTCT
Coriaria nepalensis isolate Cnep1 chromosome 12.
CP114492.1:9842071-9842090
ATGCTTGTTGAAGCTCGTCGACAGTGATGT9842071AACCACTTCCATCCTTGTCAAAGTATTGAAATGCTGCAACAAGATGCTCT
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 4.
CP124716.1:10747381-10747400
AAGCTTCTCGTAGCTCATCAAGCTCAATAT10747381AACCACTTCCATCCTTGTCAAAGAACATGAATGCTCTACGAAAATGCTCA
Daucus carota isolate Kuroda chromosome 5.
CP125305.1:39063114-39063133
AGGCTTGTTGAAGCTCGTCTTGGGTGATAT39063114AACCACTTCCATCCTTGTCAAAATAGGAGAAAGCCGCAAAGAGATGATCC
Musa acuminata subsp. malaccensis isolate AA chromosome 3.
CP126372.1:12552979-12552998
AAGCTTGCTGAAGTTCGTCGACTGTAATAT12552979AACCACTTCCATCCTTGTCAAAGTAAGAAAATGCTGCCACTAAATGCTCT
Musa acuminata subsp. malaccensis isolate AA chromosome 14.
CP126383.1:12434430-12434449
AAGCTTGCTGAAGTTCGTCGACTGTAATAT12434430AACCACTTCCATCCTTGTCAAAGTAAGAAAATGCTGCCACTAAATGCTCT
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:83847578-83847597
AGGCTTGCTGAAGCTCGTCTGCAGTAATGT83847578AACCACTTCCATCCTTGTCAAAGTAATTAAATGCCGCAAATAAATTATCA
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:81889896-81889915
AGGCTTGCTGAAGCTCGTCTGCAGTAATGT81889896AACCACTTCCATCCTTGTCAAAGTAATTAAATGCCGCAAATAAATTATCA
Canna indica chromosome 2.
CP136891.1:76132261-76132280
AAGCTTGCTGAAGCTCATCAACTGTGATAT76132261AACCACTTCCATCCTTGTCAAAATATGCAAAAGCTGCCACCAAATGTTCT
Canna indica chromosome 4.
CP136893.1:80375441-80375460
AAGCTTGCTGAAGCTCATCAACTGTTATAT80375441AACCACTTCCATCCTTGTCAAAATATGAAAAGGCTGCTACCAGATGTTCT
Fragaria x ananassa cultivar Benihoppe chromosome 19.
CP139757.1:8033052-8033071
ATGCTTGCCTTAGCTCAACTAATTCAATAT8033052AACCACTTCCATCCTTGTCAAAGAATATAAATGCTCGCCGGAGATGCTCA
Fragaria x ananassa cultivar Benihoppe chromosome 18.
CP139758.1:8645893-8645912
ATGCTTGCCTTAGCTCAACTAATTCAATAT8645893AACCACTTCCATCCTTGTCAAAGAATATAAATGCTCGCCGGAGATGCTCA
Fragaria x ananassa cultivar Benihoppe chromosome 17.
CP139759.1:8258968-8258987
ATGCTTGCCTTAGCTCAACTAATTCAATAT8258968AACCACTTCCATCCTTGTCAAAGAATATAAACGCTCGCCGGAGATGCTCA
Warburgia ugandensis isolate CL-2023a chromosome 10.
CP141135.1:4631053-4631072
AAGCTTGCTGGAGCTCATCAACTGTGATAT4631053AACCACTTCCATCCTTGTCAAAGTACGAAAAAGCTGCAACGAGGTGTTCT
Saururus chinensis isolate CL-2023b chromosome 11.
CP141150.1:4578278-4578297
AGGCTTGTTGCAGCTCATCTACCGTAATAT4578278AACCACTTCCATCCTTGTCAAAATATGAAAAAGCTGCTATCAGATGCTCC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A03.
HG996468.1:12351597-12351616
AAGCTTGCTGAAGTTCGTCGACTGTAATAT12351597AACCACTTCCATCCTTGTCAAAGTAAGAAAATGCTGCCACTAAATGCTCT
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A04.
HG996469.1:41908526-41908545
AGGCTTGCTGAAGTTCATCAACTGTGATAT41908526AACCACTTCCATCCTTGTCAAAATATGAAAAAGCTGCCACCAAATGTTCT
Cucumis melo genomic scaffold, anchoredscaffold00026.
LN681803.1:257630-257649
AAGCTTGCTGCAGTTCATCAACTGTGATAT257630AACCACTTCCATCCTTGTCAAAGTATCGGAAAGCTGCAACAAGATGTTCT
Cucumis melo genomic chromosome, chr_1.
LN713255.1:27326401-27326420
AAGCTTGCTGCAGTTCATCAACTGTGATAT27326401AACCACTTCCATCCTTGTCAAAGTATCGGAAAGCTGCAACAAGATGTTCT
Musa schizocarpa genome assembly, chromosome: S03.
LS990917.1:13384414-13384433
AAGCTTGCTGAAGTTCGTCGACTGTAATAT13384414AACCACTTCCATCCTTGTCAAAGTAAGAAAATGCTGCCACTAAATGCTCT
Musa schizocarpa genome assembly, chromosome: S04.
LS990918.1:46392365-46392384
AGGCTTGCTGAAGTTCATCAACTGTGATAT46392365AACCACTTCCATCCTTGTCAAAATATGAAAAAGCTGCCACCAAATGTTCT
Chrysanthemum makinoi genome assembly, chromosome: 3.
OU343219.1:184330325-184330344
ACGCCTGCTGAAGTTCATCAACCGTGATAT184330325AACCACTTCCATCCTTGTCAAAATACTGAAATGCAGCAACCAAGTGTTCC
Fraxinus pennsylvanica genome assembly, chromosome: 10.
OU503045.2:3065062-3065081
AAGCTTGCTGGAGTTCATCAACCGTAATAT3065062AACCACTTCCATCCTTGTCAAAATATTGGAATGCTGCCAAAAGGTGTTCC
Fraxinus pennsylvanica genome assembly, chromosome: 17.
OU503052.1:28338988-28339007
AAGCTTGCTGGAGTTCATCAACCGTAATAT28338988AACCACTTCCATCCTTGTCAAAATATTGGAATGCTGCCCAAAGGTGTTCC
Scutellaria galericulata genome assembly, chromosome: 1.
OX335784.1:30196810-30196829
AAGCTTGCTGAAGTTCATCAACAGTGATAT30196810AACCACTTCCATCCTTGTCAAAATATTGGAATGCGGCCAATAGATGTTCC
Ballota nigra genome assembly, chromosome: 1.
OX344720.1:121155815-121155834
AAGCTTGTTGTAGTTCATCAACAGTAATAT121155815AACCACTTCCATCCTTGTCAAAATACTGAAATGCTGCCAAAAGATGTTCT
Solanum dulcamara genome assembly, chromosome: 4.
OX359255.1:254716-254735
AGGCCTGCTGGAGCTCATCAACTGTAATAT254716AACCACTTCCATCCTTGTCAAAATACTGAAATGCAGCCATGAGATGTTCC
Solanum dulcamara genome assembly, chromosome: 7.
OX359258.1:8980637-8980656
AAGCTTCTCGTAGCTCATCTAGCTCAATAT8980637AACCACTTCCATCCTTGTCAAAGAACATAAATGCTCTACGAAAATGCTCA
Solanum dulcamara genome assembly, chromosome: 12.
OX359263.1:13297951-13297970
AAGCTTGCTGGACCTCGTCAACTGTTATAT13297951AACCACTTCCATCCTTGTCAAAATATTGAAATGCTGCCATGAGATGTTCC
Sherardia arvensis genome assembly, chromosome: 4.
OX415238.1:26950-26969
ACGCCTGTTGCAGTTCATCCACCGTAATAT26950AACCACTTCCATCCTTGTCAAAATAACGAAACGCAGCCATTACATGCTCC
Comarum palustre genome assembly, chromosome: 20.
OX637591.1:5487094-5487113
ATGCTTGCCTTAGCTCAACTAATTCAATAA5487094AACCACTTCCATCCTTGTCAAAGAATGTAAACGCTCGACGGAGATGCTCA
Populus nigra genome assembly, chromosome: 7.
OX637678.1:2358859-2358878
AAGCTTGCTGAAGCTCATCGACCGTGATAT2358859AACCACTTCCATCCTTGTCAAAATATTGGAATGCTGCAACAAGATGTTCC
Arctium minus genome assembly, chromosome: 4.
OX941083.1:1900465-1900484
AAGCTTGTTGAAGCTCATCAACTGTTATAT1900465AACCACTTCCATCCTTGTCAAAATACTGGAATGCCGCCACAAGGTGCTCC
Arctium minus genome assembly, chromosome: 4.
OX941083.1:2839397-2839416
AAGCTTGTTGAAGCTCATCAACTGTTATAT2839397AACCACTTCCATCCTTGTCAAAATACTGGAATGCCGCCACAAGGTGCTCC
Spergularia bocconei genome assembly, chromosome: 7.
OY734948.1:22821250-22821269
AGCCATCTCGTAGCTCATCCAGTTCAATGT22821250AACCACTTCCATCCTTGTCAAAGTAAGTGAATGCCTTTTGGAAGTGCTCA
Spergularia marina genome assembly, chromosome: 5.
OY804548.1:25884336-25884355
AGCCATCTCGTAGCTCATCCAGTTCAATGT25884336AACCACTTCCATCCTTGTCAAAGTAAGTGAATGCCTTTTGGAAGTGCTCA
Spergularia marina genome assembly, chromosome: 9.
OY804552.1:23781807-23781826
AGCCATCTCGTAGCTCATCCAGTTCAATGT23781807AACCACTTCCATCCTTGTCAAAGTAAGTGAATGCCTTTTGGAAGTGCTCA
Triglochin maritima genome assembly, chromosome: 3.
OY821772.1:42546154-42546173
ATGCCTCCTGCAGCTCATCAACCGTGATAT42546154AACCACTTCCATCCTTGTCAAAATACGAAAATGCTGCAGCTAAATGTTCT
Viola odorata genome assembly, chromosome: 8.
OY829544.1:166521-166540
AAGCTTGCTGAAGCTCGTCAACTGTAATAT166521AACCACTTCCATCCTTGTCAAAGTATCGGAACGCAGCAACAAGATGTTCC
Alisma plantago-aquatica genome assembly, chromosome: 4.
OY856412.1:961061785-961061804
AAGCTTGTTGAAGCTCGTCGATTGTTATAT961061785AACCACTTCCATCCTTGTCAAAATAGGAAAATGCTGCAACTAGATGTTCC
Calendula officinalis genome assembly, chromosome: 7.
OY970826.1:66419150-66419169
AAGCTTGTTGAAGCTCATCAACCGTTATAT66419150AACCACTTCCATCCTTGTCAAAATACTGAAACGCAGCCACAAGGTGCTCT
Inga laurina genome assembly, chromosome: 1.
OY979701.1:86493729-86493748
AAGCTTGTTGAAGCTCATCAACTGTAATAT86493729AACCACTTCCATCCTTGTCAAAATATTGGAAGGCTGCAATTAGATGTTCC
Narthecium ossifragum genome assembly, chromosome: 1.
OY986963.1:6944500-6944519
AGGCTTGCTGAAGCTCATCGACTGTAATGT6944500AACCACTTCCATCCTTGTCAAAATAGGAGAATGCTGCCACCATATGCTCT
Erodium maritimum genome assembly, chromosome: 1.
OY997588.1:134234540-134234559
AAGCTTGTTGAAGCTCATCAACGGTAATGT134234540AACCACTTCCATCCTTGTCAAAGTATTGAAATGCTGCAACAAGATGTTCC
Persicaria maculosa genome assembly, chromosome: 13.
OY998263.1:38636753-38636772
ATGCTTGTTGAAGTTCGTCTATAGTTATAT38636753AACCACTTCCATCCTTGTCAAAGTATGAAAAGGCAGCAAATAGATGATCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AACCACTTCCATCCTTGTCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AACCACTTCCATCCTTGTCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
3.294 | 3.285 | search_plus_done; http://172.18.8.135:50400/match?q=AACCACTTCCATCCTTGTCA&k=0&no_gap=0&offset=0&limit=50
3.394 | 0.099 | search_minus_done; http://172.18.8.135:50400/match?q=TGACAAGGATGGAAGTGGTT&k=0&no_gap=0&offset=0&limit=0
3.394 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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