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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 21:33:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mus musculus genome assembly, chromosome: 18.
OW971560.1:24188334-24188353
TAATTGATACCTAAGGCTGGAAGCCCTGTG24188334AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGATTACAT
Mus musculus genome assembly, chromosome: 18.
OW971591.1:24487105-24487124
TAATTGATACCTAAGGCTGGAAGCCCTGTG24487105AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGATTACAT
Mus musculus genome assembly, chromosome: 18.
OW971612.1:24487435-24487454
TAATTGATACCTAAGGCTGGAAGCCCTGTG24487435AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGATTACAT
Mus musculus domesticus genome assembly, chromosome: 18.
OW971622.1:24266938-24266957
TAATTGATACCTAAGGCTGGAAGCCCTGTG24266938AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGATTACAT
Mus musculus genome assembly, chromosome: 18.
OW971654.1:24936689-24936708
TAATTGATACCTAAGGCTGGAAGCCCTGTG24936689AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGATTACAT
Mus musculus molossinus genome assembly, chromosome: 18.
OW971675.1:24530372-24530391
TCATTGATAACTATGGCTGGAAGCCCCTTG24530372AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGCTTACAT
Mus spretus genome assembly, chromosome: 18.
OW971696.1:24638934-24638953
TCATTGATAACTAAGGCTGGAAGCCCCGTG24638934AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTTTGTGCTTACAT
Mus musculus genome assembly, chromosome: 18.
OW971708.1:24155898-24155917
TAATTGATACCTAAGGCTGGAAGCCCTGTG24155898AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGATTACAT
Mus musculus genome assembly, chromosome: 18.
OW971738.1:24339727-24339746
TAATTGATACCTAAGGCTGGAAGCCCTGTG24339727AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGATTACAT
Mus musculus genome assembly, chromosome: 18.
OW971759.1:24496468-24496487
TAATTGATACCTAAGGCTGGAAGCCCTGTG24496468AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGATTACAT
Mus musculus musculus genome assembly, chromosome: 18.
OW971780.1:24705516-24705535
TCATTGATAACTATGGCTGGAAGCCCCTTG24705516AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGCTTACAT
Mus musculus genome assembly, chromosome: 18.
OW971801.1:24247060-24247079
TAATTGATACCTAAGGCTGGAAGCCCTGTG24247060AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGATTACAT
Mus musculus genome assembly, chromosome: 18.
OW971822.1:24435237-24435256
TAATTGATACCTAAGGCTGGAAGCCCTGTG24435237AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGATTACAT
Mus musculus castaneus genome assembly, chromosome: 18.
OW971834.1:24120550-24120569
TAATTGATACCTAAGGCTGGAAGCCCTGTG24120550AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGCTTACAT
Mus musculus genome assembly, chromosome: 18.
OW971853.1:24471180-24471199
TAATTGATACCTAAGGCTGGAAGCCCTGTG24471180AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGATTACAT
Mus musculus genome assembly, chromosome: 18.
OX389812.1:26483828-26483847
TAATTGATACCTAAGGCTGGAAGCCCTGTG26483828AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGATTACAT
Mus musculus genome assembly, chromosome: 18.
OX390161.1:26530951-26530970
TAATTGATACCTAAGGCTGGAAGCCCTGTG26530951AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGATTACAT
Mus musculus genome assembly, chromosome: 18.
OX439032.1:26505860-26505879
TAATTGATACCTAAGGCTGGAAGCCCTGTG26505860AACCCCCTTCCTCTTCTTGAATGAAAGAGCTTTTTGCTATGTGATTACAT
Atr02b_108_A11_C011.g1 FGP Female Amborella trichopoda Amborella trichopoda cDNA clone 122CYu_B22 5', mRNA sequence.
FD440526.1:407-426
TTTCTTTTATGAGGCCGGCCTATTTGTACA407AACCCCCTTCCTCTTCTTGAGAAGTTGAGAAAGAATGTACAATTCATTGG
Alisma plantago-aquatica genome assembly, chromosome: 4.
OY856412.1:1358975046-1358975065
TATCAAAGTAGTCGGTCCTGTGCTACCCCC1358975046AACCCCCTTCCTCTTCTTGAAGTCGTCTCGATCTTAAACAACAAAATCAT
Cepaea hortensis genome assembly, chromosome: 19.
OY992894.1:30007752-30007771
CCGGGTCTGGTAAATTTTTTTTTTTTTTTA30007752AACCCCCTTCCTCTTCTTGACATGCCCGCCATACATGGTATAAGAGCCCT
Mus musculus chromosome 18, clone RP23-341L13, complete sequence.
AC102592.6:84889-84908
ATGTAATCACATAGCAAAAAGCTCTTTCAT84889TCAAGAAGAGGAAGGGGGTTCACAGGGCTTCCAGCCTTAGGTATCAATTA
Mus musculus chromosome 18, clone RP23-189P10, complete sequence.
AC171536.3:205156-205175
ATGTAATCACATAGCAAAAAGCTCTTTCAT205156TCAAGAAGAGGAAGGGGGTTCACAGGGCTTCCAGCCTTAGGTATCAATTA
Epichloe typhina strain Pt1807_3 chromosome 6.
CP098310.1:2611619-2611638
TCTTAATTCATATCTTATCCATATTAGTAA2611619TCAAGAAGAGGAAGGGGGTTACTATATTAAGAATATAGAATTTAAGCTCT
Alisma plantago-aquatica genome assembly, chromosome: 4.
OY856412.1:1356771456-1356771475
ATGATTTTGTTGTTGAAGATCGAGACGACG1356771456TCAAGAAGAGGAAGGGGGTTGGGGGCAGCACAGGACCGAGTACTTTGATG
Alisma plantago-aquatica genome assembly, chromosome: 4.
OY856412.1:1359446895-1359446914
ATGATTTTGTTGTTGAAGATCGAGACGACT1359446895TCAAGAAGAGGAAGGGGGTTGGGGGCAACACAGGACCGACTACTTTGATA
Sthenelais limicola genome assembly, chromosome: 8.
OW804101.1:82667752-82667771
TTAAAGAGAGATCAAACTTGCAGGAAGCTG82667752TCAAGAAGAGGAAGGGGGTTGTAGGGTCCTGGGCGAGATATTGGTAGAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACCCCCTTCCTCTTCTTGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACCCCCTTCCTCTTCTTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.411 | 0.402 | search_plus_done; http://172.18.8.135:50400/match?q=AACCCCCTTCCTCTTCTTGA&k=0&no_gap=0&offset=0&limit=50
0.526 | 0.116 | search_minus_done; http://172.18.8.135:50400/match?q=TCAAGAAGAGGAAGGGGGTT&k=0&no_gap=0&offset=0&limit=29
0.531 | 0.004 | cgi_end;

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