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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:48:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus x robusta genome assembly, chromosome: 5.
OY720329.1:38668510-38668529
CTGAGGATATTATTATGATCAGCTATCTGC38668510AACCGCCCTTTATGTGATTGAACTACACAGCAGCAATTGTGCTTTTTGCA
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:2466214-2466233
TGCAAAAAGCACAATTGCTGCTGTGTAGTT2466214CAATCACATAAAGGGCGGTTGCAGATAGCTGATCATAATAATATCCTCAG
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2424847-2424866
TGCAAAAAGCACAATTGCTGCTGTGTAGTT2424847CAATCACATAAAGGGCGGTTGCAGATAGCTGATCATAATAATATCCTCAG
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2524123-2524142
TGCAAAAAGCACAATTGCTGCTGTGTAGTT2524123CAATCACATAAAGGGCGGTTGCGGATAGCTGATCATAATAATATCCTCAG
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:2621200-2621219
TGCAAAAAGCACAATTGCTGCTGTGTAGTT2621200CAATCACATAAAGGGCGGTTGCAGATAGCTGATCATAATAATATCCTCAG
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2463609-2463628
TGCAAAAAGCACAATTGCTGCTGTGTAGTT2463609CAATCACATAAAGGGCGGTTGCAGATAGCTGATCATAATAATATCCTCAG
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:2490876-2490895
TGCAAAAAGCACAATTGCTGCTGTGTAGTT2490876CAATCACATAAAGGGCGGTTGCAGATAGCTGATCATAATAATATCCTCAG
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2579181-2579200
TGCAAAAAGCACAATTGCTTCTGTGTAGTT2579181CAATCACATAAAGGGCGGTTGCAGATAGCTGATCATAATAATATCCTCAG
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2572353-2572372
TGCAAAAAGCACAATTGCTGCTGTGTAGTT2572353CAATCACATAAAGGGCGGTTGCAGATAGCTGATCATAATAATATCCTCAG
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2622793-2622812
TGCAAAAAGCACAATTGCTGCTGTGTAGTT2622793CAATCACATAAAGGGCGGTTGCAGATAGCTGATCATAATAATATCCTCAG
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2662741-2662760
TGCAAAAAGCACAATTGCTGCTGTGTAGTT2662741CAATCACATAAAGGGCGGTTGCAGATAGCTGATCATAATAATATCCTCAG
Malus domestica genome assembly, chromosome: 11.
OU745001.1:2643146-2643165
TGCAAAAAGCACAATTGCTTCTGTGTAGTT2643146CAATCACATAAAGGGCGGTTGCAGATAGCTGATCATAATAATATCCTCAG
Elegia similella genome assembly, chromosome: 19.
OX383944.1:15091220-15091239
TAGCTTATTGGACCTGAAATCCCAATGCTG15091220CAATCACATAAAGGGCGGTTCACACCGCCAGCGAGCGAGCGAGGCGAGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACCGCCCTTTATGTGATTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACCGCCCTTTATGTGATTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.163 | 0.155 | search_plus_done; http://172.18.8.135:50400/match?q=AACCGCCCTTTATGTGATTG&k=0&no_gap=0&offset=0&limit=50
0.254 | 0.091 | search_minus_done; http://172.18.8.135:50400/match?q=CAATCACATAAAGGGCGGTT&k=0&no_gap=0&offset=0&limit=49
0.262 | 0.008 | cgi_end;

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