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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 18:44:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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EST517129 cSTS Solanum tuberosum cDNA clone cSTS24D6 5' sequence, mRNA sequence.
BI176046.1:569-593
ATGAAATGCGAGTGAGACTAAGTGATGGAG569AACCTGATAAACCATTGATAGTCCATGTTGGACGAATTGGAGTTGAGAAGAGTTT
EST597200 mixed potato tissues Solanum tuberosum cDNA clone STMCB96 3' end, mRNA sequence.
BQ111624.1:401-425
ATGAAATGCGAGTGAGACTAAGTGATGGAG401AACCTGATAAACCATTGATAGTCCATGTTGGACGAATTGGAGTTGAGAAGAGTTT
29297 Suspension culture Solanum tuberosum cDNA, mRNA sequence.
CN215490.1:183-207
ATGAAATGCGAGTGAGACTAAGTGATGGAG183AACCTGATAAACCATTGATAGTCCATGTTGGACGAATTGGAGTTGAGAAGAGTTT
chiou01149 Subtractive cDNA library of roots under phosphate starvation Solanum lycopersicum cDNA clone LEPSR07H04, mRNA sequence.
DV105348.2:471-495
ATGAAATGCGGCTAAGACTGAGTGACGGGG471AACCTGATAAACCATTGATAGTCCATGTTGGACGACTTGGAGTCGAGAAGAATTT
NecGex_125C05 Ornamental tobacco (LxS8) Stage 6 Floral nectary cDNA library Nicotiana langsdorffii x Nicotiana sanderae cDNA clone NecGEx_Clone 125C05 similar to TIGR_Ath1|At5g01220.1 68418.m00027 UDP
EB689527.1:605-629
ATGAAATGCGACTAAGACTGAGCAATGGGG605AACCTGATAAACCATTGATAGTCCATGTTGGACGACTTGGAGTGGAGAAGAATTT
TSA: Capsicum annuum MA_MegaContig_31749, mRNA sequence.
JW160434.1:1051-1075
ATGCAATGCGATTAAGATTGAGCAATGGGG1051AACCTGATAAACCATTGATAGTCCATGTTGGACGACTTGGAGTTGAGAAGAATTT
TSA: Capsicum annuum MASupSingCtng_24728, mRNA sequence.
JW162588.1:141-165
TCCTGTTACTCTTCATGATCAGCAATGGGG141AACCTGATAAACCATTGATAGTCCATGTTGGACGACTTGGAGTTGAGAAGAATTT
TSA: Capsicum annuum MACs80_46064, mRNA sequence.
JW166694.1:129-153
TCCTGTTACTCTTCATGATCAGCAATGGGG129AACCTGATAAACCATTGATAGTCCATGTTGGACGACTTGGAGTTGAGAAGAATTT
POTG020TF Solanum tuberosum RHPOTKEY BAC ends Solanum tuberosum genomic clone RHPOTKEY055_C15, genomic survey sequence.
EI834004.1:362-386
TCCTGTTACTTTTCATGATCAGTGACGGGG362AACCTGATAAACCATTGATAGTCCATGTTGGACGACTTGGAGTCGAGAAGAATTT
POTMJ77TF Solanum tuberosum RHPOTKEY BAC ends Solanum tuberosum genomic clone RHPOTKEY113_N10, genomic survey sequence.
ER827679.1:361-385
TCCTGTTACTTTTCATGATCAGTGACGGGG361AACCTGATAAACCATTGATAGTCCATGTTGGACGACTTGGAGTCGAGAAGAATTT
1061064112978_TF POTATO-F-03-40KB Solanum phureja genomic clone 1061064112978, genomic survey sequence.
GS640110.1:379-403
TCCTGTTACTTTTCATGATCAGTGATGGGG379AACCTGATAAACCATTGATAGTCCATGTTGGACGACTTGGAGTCGAGAAGAATTT
Solanum lycopersicum cDNA, clone: LEFL1001AC02, HTC in leaf.
AK319681.1:1056-1080
ATGAAATGCGGCTAAGACTGAGTGACGGGG1056AACCTGATAAACCATTGATAGTCCATGTTGGACGACTTGGAGTCGAGAAGAATTT
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:206253703-206253727
TCCTGTTACTCTTCATGATCAGCAATGGGG206253703AACCTGATAAACCATTGATAGTCCATGTTGGACGACTTGGAGTTGAGAAGAATTT
Lycopersicon esculentum clone 133207F, mRNA sequence.
BT014103.1:1036-1060
ATGAAATGCGGCTAAGACTGAGTGACGGGG1036AACCTGATAAACCATTGATAGTCCATGTTGGACGACTTGGAGTCGAGAAGAATTT
Solanum tuberosum cultivar P8 chromosome 10.
CP046683.1:53989885-53989909
TCCTGTTACTTTTCATGATCAGTGAYGGGG53989885AACCTGATAAACCATTGATAGTCCATGTTGGACGACTTGGAGTCGAGAAGAATTT
Solanum tuberosum cultivar P8 chromosome 9.
CP046687.1:346381-346405
TCCTGCTGTTATTCACAATAAGTGRTGGAG346381AACCTGATAAACCATTGATAGTCCATGTTGGACGAATTGGAGTTGAGAAGAGTTT
Solanum tuberosum cultivar MSH/14-112 chromosome 9.
CP046693.1:346380-346404
TCCTGCTGTTATTCACAATAAGTGRTGGAG346380AACCTGATAAACCATTGATAGTCCATGTTGGACGAATTGGAGTTGAGAAGAGTTT
Solanum tuberosum cultivar MSH/14-112 chromosome 10.
CP046694.1:53990053-53990077
TCCTGTTACTTTTCATGATCAGTGAYGGGG53990053AACCTGATAAACCATTGATAGTCCATGTTGGACGACTTGGAGTCGAGAAGAATTT
Solanum pinnatisectum cultivar CGN17745 chromosome 10.
CP047557.1:53982582-53982606
TCCTGTTACTTTTCATGATCAGTGACGGGG53982582AACCTGATAAACCATTGATAGTCCATGTTGGACGACTTGGAGTCGAGAAGAATTT
Solanum pinnatisectum cultivar CGN17745 chromosome 9.
CP047560.1:346381-346405
TCCTGCTGTTATTCACAATAAGTGGTGGAG346381AACCTGATAAACCATTGATAGTCCATGTTGGACGAATTGGAGTTGAGAAGAGTTT
Solanum tuberosum cultivar Solyntus chromosome 9.
CP055242.1:669089-669113
TCCTGCTGTTATTCACAATAAGTGATGGAG669089AACCTGATAAACCATTGATAGTCCATGTTGGACGAATTGGAGTTGAGAAGAGTTT
Capsicum rhomboideum cultivar Andean isolate CrT2T chromosome 10.
CP124710.1:118538981-118539005
TCCTGTTACTCTTCATGATCAGCAATGGGG118538981AACCTGATAAACCATTGATAGTCCATGTTGGACGACTCGGAGTCGAGAAGAATTT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:211056546-211056570
TCCTGTTACTCTTCATGATCAGCAATGGGG211056546AACCTGATAAACCATTGATAGTCCATGTTGGACGACTTGGAGTTGAGAAGAATTT
Solanum verrucosum cultivar 11H23 chromosome 9.
CP133620.1:341507-341531
TCCTGCTGTTATTCACAATAAGTGATGGAG341507AACCTGATAAACCATTGATAGTCCATGTTGGACGAATTGGGGTTGAGAAGAGTTT
Solanum verrucosum cultivar 11H23 chromosome 10.
CP133621.1:51699941-51699965
TCCTGTTACTTTTCATGATCAGTGACGGGG51699941AACCTGATAAACCATTGATAGTCCATGTTGGACGACTTGGAGTCGAGAAGAATTT
chiou00210 Subtractive cDNA library of roots under phosphate starvation Solanum lycopersicum cDNA clone LEPSR03B06, mRNA sequence.
DV105721.1:586-610
AAATTCTTCTCGACTCCAAGTCGTCCAACA586TGGACTATCAATGGTTTATCAGGTTCCCCGTCACTCAGTCTTAGCCGCATTTCAT
piTE002xM21.b1.ab1 PiTE - Interaction library between Potato tuber and Phytophthora infestans Phytophthora infestans cDNA, mRNA sequence.
ES452859.1:170-194
AAACTCTTCTCAACTCCAATTCGTCCAACA170TGGACTATCAATGGTTTATCAGGTTCTCCATCACTTAGTCTCACTCGCATTTCCT
piTE001nB11.b1.ab1 PiTE - Interaction library between Potato tuber and Phytophthora infestans Phytophthora infestans cDNA, mRNA sequence.
ES452941.1:171-195
AAACTCTTCTCAACTCCAATTCGTCCAACA171TGGACTATCAATGGTTTATCAGGTTCTCCATCACTTAGTCTCACTCGCATTTCAT
piTE006xJ18.b1.ab1 PiTE - Interaction library between Potato tuber and Phytophthora infestans Phytophthora infestans cDNA, mRNA sequence.
ES454074.1:171-195
AAACTCTTCTCAACTCCAATTCGTCCAACA171TGGACTATCAATGGTTTATCAGGTTCTCCATCACTTAGTCTCACTCGCATTTCCT
TSA: Capsicum annuum MGMT_Contig42289 mRNA sequence.
JW092533.1:3801-3825
AAATTCTTCTCAACTCCAAGTCGTCCAACA3801TGGACTATCAATGGTTTATCAGGTTCCCCATTGCTCAATCTTAATCGCATTGCAT
TSA: Nicotiana benthamiana isotig01730.Nb_leaf mRNA sequence.
KA737985.1:424-448
AAACTCTTCTCAACTCCAAGTCGTCCAACA424TGGACTATCAATGGTTTATCAGGTTCTCCATTGCTTAGTCTTAGTCGCATTTCAT
TSA: Nicotiana benthamiana isotig01731.Nb_leaf mRNA sequence.
KA737986.1:424-448
AAACTCTTCTCAACTCCAAGTCGTCCAACA424TGGACTATCAATGGTTTATCAGGTTCTCCATTGCTTAGTCTTAGTCGCATTTCAT
Solanum lycopersicum Micro-Tom DNA, chromosome 10, draft genome sequence.
AP028944.1:63603030-63603054
AAATTCTTCTCGACTCCAAGTCGTCCAACA63603030TGGACTATCAATGGTTTATCAGGTTCCCCGTCACTGATCATGAAAAGTAACAGGA
Solanum lycopersicum cultivar I-3 chromosome 10.
CP023766.1:64413148-64413172
AAATTCTTCTCGACTCCAAGTCGTCCAACA64413148TGGACTATCAATGGTTTATCAGGTTCCCCGTCACTGATCATGAAAAGTAACAGGA
Solanum tuberosum cultivar Solyntus chromosome 10.
CP055243.1:45301688-45301712
AAATTCTTCTCGACTCCAAGTCGTCCAACA45301688TGGACTATCAATGGTTTATCAGGTTCCCCATCACTGATCATGAAAAGTAACAGGA
Solanum pennellii chromosome ch10, complete genome.
HG975449.1:81374212-81374236
AAATTCTTCTCGACTCCAAGTCGTCCAACA81374212TGGACTATCAATGGTTTATCAGGTTCCCCGTCACTGATCATGAAAAGTAACAGGA
Solanum lycopersicum chromosome ch10, complete genome.
HG975522.1:63736820-63736844
AAATTCTTCTCGACTCCAAGTCGTCCAACA63736820TGGACTATCAATGGTTTATCAGGTTCCCCGTCACTGATCATGAAAAGTAACAGGA
Solanum lycopersicum genome assembly, chromosome: 10.
OU640353.1:65501817-65501841
AAATTCTTCTCGACTCCAAGTCGTCCAACA65501817TGGACTATCAATGGTTTATCAGGTTCCCCGTCACTGATCATGAAAAGTAACAGGA
Solanum dulcamara genome assembly, chromosome: 3.
OX359254.1:8480440-8480464
AAACTCTTCTCAACTCCAAGTCGTCCAACA8480440TGGACTATCAATGGTTTATCAGGTTCTCCATCACTTATTGTGAACAACAGCAGGA
Solanum dulcamara genome assembly, chromosome: 12.
OX359263.1:7021629-7021653
AAATTCTTCTCGACTCCAAGTCGTCCAACA7021629TGGACTATCAATGGTTTATCAGGTTCCCCATTACTGATCATGAAAGTAACAGGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACCTGATAAACCATTGATAGTCCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACCTGATAAACCATTGATAGTCCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.484 | 0.475 | search_plus_done; http://172.18.8.135:50400/match?q=AACCTGATAAACCATTGATAGTCCA&k=0&no_gap=0&offset=0&limit=50
0.829 | 0.344 | search_minus_done; http://172.18.8.135:50400/match?q=TGGACTATCAATGGTTTATCAGGTT&k=0&no_gap=0&offset=0&limit=25
0.838 | 0.010 | cgi_end;

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