GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:40:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

CHO_OF4579xi18f1.ab1 CHO_OF4 Nicotiana tabacum genomic 5', genomic survey sequence.
FH331103.1:600-623
CCACCAACAATGAATGTTTGCAGATTCCAT600AACCTGGAAATTTCTGGAGGTATGTTAAAAACACCCCTGCGGCTATGCAACACT
Capsicum annuum Takanotsume DNA, chromosome 9, sequence.
AP026704.1:257288939-257288962
CCTTTAACATTGAATGTCTGCAGATTCCAT257288939AACCTGGAAATTTCTGGAGGTATGTCAAACATTTCCCCGCGGAAGAGCAATGCT
Capsicum annuum Takanotsume DNA, chromosome 9, sequence.
AP026704.1:258804613-258804636
CCTTTAACATTGAATGTCTGCAGATTCCTT258804613AACCTGGAAATTTCTGGAGGTATGTCAAACATTTCCCCACGGAAGATCAATGCT
TSA: Capsicum annuum MGMT_Contig6642, mRNA sequence.
JW056886.1:396-419
ATCATTGCTCTGCTGCTGGAAAATATTTGA396CATACCTCCAGAAATTTCCAGGTTATGGAATCTGCAGACATTCTATGTTAAAGG
CHO_OF4579xi18r1.ab1 CHO_OF4 Nicotiana tabacum genomic 3', genomic survey sequence.
FH331184.1:656-679
AGTGTTGCATAGCCGCAGGGGTGTTTTTAA656CATACCTCCAGAAATTTCCAGGTTATGGAATCTGCAAACATTCATTGTTGGTGG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 9.
CP124723.1:7921144-7921167
AGCATTGATCTTCCGTGGGGAAATGTTTGA7921144CATACCTCCAGAAATTTCCAGGTTAAGGAATCTGCAGACATTCAATGTTAAAGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AACCTGGAAATTTCTGGAGGTATG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AACCTGGAAATTTCTGGAGGTATG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.136 | 0.127 | search_plus_done; http://172.18.8.135:50400/match?q=AACCTGGAAATTTCTGGAGGTATG&k=0&no_gap=0&offset=0&limit=50
0.213 | 0.077 | search_minus_done; http://172.18.8.135:50400/match?q=CATACCTCCAGAAATTTCCAGGTT&k=0&no_gap=0&offset=0&limit=47
0.215 | 0.002 | cgi_end;

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