GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 16:21:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Capsicum annuum Takanotsume DNA, chromosome 5, sequence.
AP026700.1:11977880-11977899
TTAGCACGGATCGTCTTCTTATAATGCTCG11977880AACGGAACACGAAGGAACTGGTGTTCTAATTTCATAGACTCCGATAGTTG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 5.
CP124727.1:12803934-12803953
TTAGCACGGATCGTCTTCTTATAATGCTCG12803934AACGGAACACGAAGGAACTGGTGTTCTAATTTCATAGACTCCGATAGTTG
KS15016D11 KS15 Capsicum annuum cDNA, mRNA sequence.
GD064877.1:137-156
CAACTATCGGAGTCTATGAAATTAGAACAC137CAGTTCCTTCGTGTTCCGTTCGAGCATTATAAGAAGACGATCCGTGCTAA
TSA: Capsicum annuum MGMT_Contig9094, mRNA sequence.
JW059338.1:272-291
CAACTATCGGAGTCTATGAAATTAGAACAC272CAGTTCCTTCGTGTTCCGTTCGAGCATTATAAGAAGACGATCCGTGCTAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AACGGAACACGAAGGAACTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AACGGAACACGAAGGAACTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=AACGGAACACGAAGGAACTG&k=0&no_gap=0&offset=0&limit=50
0.195 | 0.100 | search_minus_done; http://172.18.8.135:50400/match?q=CAGTTCCTTCGTGTTCCGTT&k=0&no_gap=0&offset=0&limit=48
0.197 | 0.002 | cgi_end;

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