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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:31:14, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Sequence 168211 from Patent EP2090662.
HB818997.1:119-138
ATCACTGTGTTAACGATGGAGAAGTCACAA119AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCAAGAAGCAAG
Sequence 168325 from Patent EP2090662.
HB819111.1:223-242
ATCATTGTGTCAACGATGGAGAAGTCACAA223AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGGAGCAAG
10FGYSUA_UP_004_D11_17OCT2003_089 Brassica seedling 10FGYSUA Brassica napus cDNA 5', mRNA sequence.
CN728985.1:199-218
ATCATTGTGTCAACGATGGAGAAGTCACAA199AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
11FGYSDB_UP_001_C07_16OCT2003_059 Brassica seedling 11FGYSDB Brassica napus cDNA 5', mRNA sequence.
CN729145.1:220-239
ATCACTGTGTCAACGATGGAGAAGTCACAA220AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGAAGCAAG
24RDBNH_UP_007_A10_19DEC2003_080 Brassica napus 24RDBNH Brassica napus cDNA 5', mRNA sequence.
CN730317.1:199-218
ATCATTGTGTCAACGATGGAGAAGTCACAA199AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
26RDBNT_UP_008_D12_20JAN2004_090 Brassica napus 26RDBNT Brassica napus cDNA 5', mRNA sequence.
CN735778.1:199-218
ATCATTGTGTCAACGATGGAGAAGTCACAA199AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
29-E010486-021-001-J07-T7R ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022J071Q, mRNA sequence.
CX193727.1:84-103
ATCATTGTGTCAACGATGGAGAAGTCACAA84AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGGAGCAAG
38RDBRM_UP_005_F08_30MAR2004_054 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
CX265985.1:186-205
ATCACTGTGTTAATGATGGAGAAGTCACAA186AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCAAGAAGCAAG
38RDBRM_UP_008_H02_31MAR2004_002 Brassica rapa 38RDBRM Brassica rapa cDNA 5', mRNA sequence.
CX266275.1:193-212
ATCATTGTGTCAACGATGGAGAAGTCACAA193AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGGAGCAAG
39RDBRT_UP_012_C02_05APR2004_012 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
CX270600.1:173-192
ATCACTGTGTTAATGATGGAGAAGTCACAA173AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCAAGAAGCAAG
39RDBRT_UP_019_G12_05APR2004_084 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
CX271199.1:219-238
ATCATTGTGTCAACGATGGGGAAGTCACAA219AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTTGAGTCAAGAAGCAAG
JKBNHS1_UP_015_D01_02JUL2004_009 Brassica napus JKBNHS1 Brassica napus cDNA 5', mRNA sequence.
CX281886.1:223-242
ATCACTGTGTCAACGATGGAGAAGTCACAA223AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGAAGCAAG
Brassica oleracea var. viridis mRNA, clone: KALE-007D17, 5' end sequence.
DK458322.1:201-220
ATCATTGTGTCAACGATGGAGAAGTCACAA201AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
Brassica oleracea var. viridis mRNA, clone: KALE-010E04, 5' end sequence.
DK459474.1:201-220
ATCATTGTGTCAACGATGGAGAAGTCACAA201AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
Brassica oleracea var. viridis mRNA, clone: KALE-078J13, 5' end sequence.
DK485597.1:202-221
ATCATTGTGTCAACGATGGAGAAGTCACAA202AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
Brassica oleracea var. viridis mRNA, clone: KALE-113L13, 5' end sequence.
DK499043.1:202-221
ATCATTGTGTCAACGATGGAGAAGTCACAA202AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
Brassica oleracea var. viridis mRNA, clone: KALE-155F16, 5' end sequence.
DK514951.1:200-219
ATCATTGTGTCAACGATGGAGAAGTCACAA200AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
48RDOAM_UP_010_E01_12AUG2004_007 O. Alba 48RDOAM Brassica oleracea cDNA 5', mRNA sequence.
DY014371.1:201-220
ATCATTGTGTCAACGATGGAGAAGTCACAA201AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
48RDOAM_UP_036_A08_14SEP2004_064 O. Alba 48RDOAM Brassica oleracea cDNA 5', mRNA sequence.
DY018891.1:142-161
ATCATTGTGTCAACGATGGAGAAGTCACAA142AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
47RDOAH_UP_003_G05_27JUL2004_035 O. Alba 47RDOAH Brassica oleracea cDNA 5', mRNA sequence.
DY025868.1:202-221
ATCATTGTGTCAACGATGGAGAAGTCACAA202AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
4ETGS72H_UP_016_G02_14FEB2005_004 Brassica napus 4ETGS72h Brassica napus cDNA 5', mRNA sequence.
EE434215.1:192-211
ATCATTGTGTCAACGATGGAGAAGTCACAA192AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGGAGCAAG
72ETGS24_UP_021_B08_20MAY2005_062 72ETGS24 Brassica napus cDNA 5', mRNA sequence.
EE444597.1:191-210
ATCATTGTGTCAACGATGGAGAAGTCACAA191AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGGAGCAAG
74ETGS48_UP_003_H01_27APR2005_001 74ETGS48 Brassica napus cDNA 5', mRNA sequence.
EE446626.1:197-216
ATCATTGTGTCAACGATGGAGAAGTCACAA197AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGGAGCAAG
76ETGS72_UP_001_F12_11MAY2005_086 76ETGS72 Brassica napus cDNA 5', mRNA sequence.
EE449442.1:199-218
ATCATTGTGTCAACGATGGAGAAGTCACAA199AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
BNBS4DCT_UP_009_G03_24MAR2005_019 Brassica napus seeds BNBS4DCT Brassica napus cDNA 5', mRNA sequence.
EE454075.1:202-221
ATCATTGTGTCAACGATGGAGAAGTCACAA202AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
BNBS6DCT_UP_003_A08_11APR2005_064 Brassica napus seeds BNBS6DCT Brassica napus cDNA 5', mRNA sequence.
EE456158.1:226-245
ATCACTGTGTCAACGATGGAGAAGTCACAA226AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGAAGCAAG
BNBS6DCT_UP_019_F12_13APR2005_086 Brassica napus seeds BNBS6DCT Brassica napus cDNA 5', mRNA sequence.
EE457308.1:221-240
ATCACTGTGTCAACGATGGAGAAGTCACAA221AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGAAGCAAG
BNBS6DCT_UP_019_G11_13APR2005_083 Brassica napus seeds BNBS6DCT Brassica napus cDNA 5', mRNA sequence.
EE457316.1:223-242
ATCACTGTGTCAACGATGGAGAAGTCACAA223AACTCAAGCTTGACAACTCCTCTGGTACGTTATCTCTAACCAACCCCTTT
BNBS6DCT_UP_026_G08_13APR2005_052 Brassica napus seeds BNBS6DCT Brassica napus cDNA 5', mRNA sequence.
EE457837.1:223-242
ATCACTGTGTCAACGATGGAGAAGTCACAA223AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGAAGCAAG
BNDH5DCT_UP_007_F04_16DEC2003_022 Brassica napus BNDH5DCT Brassica napus cDNA 5', mRNA sequence.
EE461336.1:199-218
ATCATTGTGTCAACGATGGAGAAGTCACAA199AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
24RDBNH_UP_048_A02_28FEB2004_016 Brassica napus 24RDBNH Brassica napus cDNA 5', mRNA sequence.
EE507715.1:191-210
ATCATTGTGTCAACGATGGAGAAGTCACAA191AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGGAGCAAG
36RDBRG_UP_052_B09_22NOV2005_077 Brassica rapa 36RDBRG Brassica rapa cDNA 5', mRNA sequence.
EE520471.1:190-209
ATCACTGTGTTAATGATGGAGAAGTCACAA190AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCAAGAAGCAAG
37RDBRH_UP_016_F05_01APR2004_037 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
EE523478.1:187-206
ATCACTGTGTTAATGATGGAGAAGTCACAA187AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCAAGAAGCAAG
37RDBRH_UP_049_F01_10JUL2004_005 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
EE526022.1:199-218
ATCACTGTGTTAATGATGGAGAAGTCACAA199AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCAAGAAGCAAG
39RDBRT_UP_057_B07_30NOV2005_061 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
EE529253.1:191-210
ATCACTGTGTTAATGATGGAGAAGTCACAA191AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCAAGAAGCAAG
46RDOAG_UP_016_A12_24SEP2004_096 O. Alba 46RDOAG Brassica oleracea cDNA 5', mRNA sequence.
EE531191.1:117-136
ATCACTGTGTCAACGATGGAGAAGTCACAA117AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGAAGCAAG
EST1507 3-9 DAP Brassica Napus seed cDNA library Brassica napus cDNA clone B064G121, mRNA sequence.
EL624001.1:225-244
ATCACTGTGTCAACGATGGAGAAGTCACAA225AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGAAGCAAG
BNARO2GH_T3_011_H12_15DEC2006_082 Brassica napus BNARO2GH Brassica napus cDNA 5', mRNA sequence.
ES911603.1:112-131
ATCACTGTGTCAACGATGGAGAAGTCACAA112AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGAAGCAAG
24RDBNH_UP_129_F10_13DEC2006_070 Brassica napus 24RDBNH Brassica napus cDNA 5', mRNA sequence.
ES918120.1:199-218
ATCATTGTGTCAACGATGGAGAAGTCACAA199AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
24RDBNH_UP_149_B06_13DEC2006_046 Brassica napus 24RDBNH Brassica napus cDNA 5', mRNA sequence.
ES919874.1:197-216
ATCATTGTGTCAACGATGGAGAAGTCACAA197AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
24RDBNH_UP_167_B11_14DEC2006_093 Brassica napus 24RDBNH Brassica napus cDNA 5', mRNA sequence.
ES921478.1:199-218
ATCATTGTGTCAACGATGGAGAAGTCACAA199AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
24RDBNH_UP_175_A11_14DEC2006_095 Brassica napus 24RDBNH Brassica napus cDNA 5', mRNA sequence.
ES922165.1:200-219
ATCATTGTGTCAACGATGGAGAAGTCACAA200AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
26RDBNT_UP_089_D01_09MAR2006_009 Brassica napus 26RDBNT Brassica napus cDNA 5', mRNA sequence.
ES927213.1:205-224
ATCATTGTGTCAACGATGGAGAAGTCACAA205AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
36RDBRG_UP_102_D12_20JAN2006_090 Brassica rapa 36RDBRG Brassica rapa cDNA 5', mRNA sequence.
ES931349.1:189-208
ATCACTGTGTTAATGATGGAGAAGTCACAA189AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCAAGAAGCAAG
37RDBRH_UP_084_G05_23JAN2006_035 Brassica rapa 37RDBRH Brassica rapa cDNA 5', mRNA sequence.
ES932415.1:190-209
ATCACTGTGTTAATGATGGAGAAGTCACAA190AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCAAGAAGCAAG
39RDBRT_UP_078_A09_24JAN2006_079 Brassica rapa 39RDBRT Brassica rapa cDNA 5', mRNA sequence.
ES936020.1:20-39
AATGATGGAGAAGTCACAA20AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCAAGAAGCAAG
48RDOAM_UP_071_D05_03FEB2006_041 Brassica oleracea 48RDOAM Brassica oleracea cDNA 5', mRNA sequence.
ES944602.1:202-221
ATCATTGTGTCAACGATGGAGAAGTCACAA202AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAATCGAGGAGCAAG
RR1AS18TF RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 5', mRNA sequence.
EV526905.1:120-139
ATCATTGTATCAACGATGGGGAAGTCACAA120AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTTGAATCGAGAAGCAAG
RR2AT14TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EV537332.1:194-213
ATCATTGTATCAACGATGGGGAAGTCACAA194AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGAAGCAAG
RR2AZ35TFB RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EV537842.1:202-221
ATCATTGTGTCAACGATGGAGAAGTTACAA202AACTCAAGCTTGACAACTCCTCTGGAGCTGGATTTGAATCTAAGAGCAAG
RR2B296TF RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EV538164.1:202-221
ATCATTGTGTCAACGATGGAGAAGTTACAA202AACTCAAGCTTGACAACTCCTCTGGAGCTGGATTTGAATCTAAGAGCAAG
RR3AR05TF RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 5', mRNA sequence.
EV549994.1:185-204
ACCATTGTATCAACGATGGGGAAGTCACAA185AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTTGAGTCGATAGGCAAG
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_15146.
FX713779.1:141-160
ATCATTGTGTCAACGATGGAGAAGTCACAA141AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGGAGCAAG
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_5487.
FX760073.1:215-234
ATCATTGTGTCAACGATGGAGAAGTCACAA215AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCGAGGAGCAAG
TSA: Raphanus sativus RS18894 mRNA sequence.
JT803441.1:177-196
ATCATTGTATCAACGATGGGGAAGTCACAA177AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTTGAATCGAGAAGCAAG
KBrB003I13F KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB003I13, genomic survey sequence.
DX012588.1:673-692
ATCACTGTGTTAACGATGGAGAAGTCACAA673AACTCAAGCTTGACAACTCCTCTGGTACATAACCAAACGCCTTCCCTCTG
KBrB015G10R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB015G10, genomic survey sequence.
DX021593.1:677-696
ATCACTGTGTTAACGATGGAAAAGTCACAA677AACTCAAGCTTGACAACTCCTCTGGAACATAACCCA
KBrB033B16R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB033B16, genomic survey sequence.
DX035083.1:678-697
ATCACTGTGTTAACGATGGAGAAGTCACAA678AACTCAAGCTTGACAACTCCTCTGGTACATAACCAAACGCCTTCCCTCTG
KBrB047L07F KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB047L07, genomic survey sequence.
DX046151.1:659-678
ATCACTGTGTTAACGATGGAGAAGTCACAA659AACTCAAGCTTGACAACTCCTCTGGTACATAACCAAACGCCTTCCCTCTG
KBrB050H14F KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB050H14, genomic survey sequence.
DX048230.1:669-688
ATCACTGTGTTAACGATGGAGAAGTCACAA669AACTCAAGCTTGACAACTCCTCTGGTACATAACCAAACGCCTTCCCTCTG
KBrB115L10R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB115L10, genomic survey sequence.
ED526348.1:658-677
ATCACTGTGTTAACGATGGAGAAGTCACAA658AACTCAAGCTTGACAACTCCTCTGGTGTTTTGCATGCTCTGTTTCTGAAT
KBrB122C24R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB122C24, genomic survey sequence.
ED531147.1:662-681
ATCACTGTGTTAACGATGGAGAAGTCACAA662AACTCAAGCTTGACAACTCCTCTGGTACATAACCAAACGCCTTCCCTCTG
KBrB129N18R KBrB, Brassica rapa BamHI BAC library Brassica rapa subsp. pekinensis genomic clone KBrB129N18, genomic survey sequence.
ED536843.1:663-682
ATCACTGTGTTAACGATGGAGAAGTCACAA663AACTCAAGCTTGACAACTCCTCTGGTACATAACCAAACGTCTTCTCTCTG
Brassica rapa xyloglucan endotransglycosylase/hydrolase (XTH1) mRNA, complete cds.
AY834281.1:132-151
ATCACTGTGTTAACGATGGAGAAGTCACAA132AACTCAAGCTTGACAACTCCTCTGGAGCTGGGTTCGAGTCAAGAAGCAAG
Brassica napus cultivar Xiang5A chromosome 4.
CP123879.1:1815302-1815321
ATCATTGTGTCAACGATGGGGAAGTCACAA1815302AACTCAAGCTTGACAACTCCTCTGGTACATAATCTATAAACAAACTCATT
Brassica napus cultivar Xiang5A chromosome 16.
CP123891.1:67339318-67339337
ATCACTGTGTCAACGATGGAGAAGTCACAA67339318AACTCAAGCTTGACAACTCCTCTGGTACGTTATCTCTAACCAACCCCTTT
Brassica napus cultivar Xiang5A chromosome 18.
CP123893.1:57346474-57346493
ATCATTGTGTCAACGATGGAGAAGTCACAA57346474AACTCAAGCTTGACAACTCCTCTGGTACATAATCTATAACCAATCCCTTT
Brassica napus genome assembly, chromosome: A09.
HG994363.1:1698972-1698991
ATCACTGTGTTAATGATGGAGAAGTCACAA1698972AACTCAAGCTTGACAACTCCTCTGGTACATAACCAAACGCCTTCCCTCTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACTCAAGCTTGACAACTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACTCAAGCTTGACAACTCC | format : html | download : | debug :

0.008 | 0.008 | search_start;
3.297 | 3.289 | search_plus_done; http://172.18.8.135:50400/match?q=AACTCAAGCTTGACAACTCC&k=0&no_gap=0&offset=0&limit=50
3.427 | 0.130 | search_minus_done; http://172.18.8.135:50400/match?q=GGAGTTGTCAAGCTTGAGTT&k=0&no_gap=0&offset=0&limit=0
3.427 | 0.000 | cgi_end;

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