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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-12 13:52:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus hybrid cultivar cultivar Flame chromosome 13.
CP141922.1:4243961-4243984
ACATCCTTTTCTTTCCCACGGGGACTGAAA4243961AACTCAGGCACAATTTCTGCAACTGAAGACTATCCTAACCTATGCTAATCTTAC
Malus hybrid cultivar cultivar Flame chromosome 13.
CP141939.1:4495668-4495691
ACATCCTTTTCTTTCCCACGGGGACTGAAA4495668AACTCAGGCACAATTTCTGCAACTGAAGACTATCCTAACCTATGCTAATCTTAC
Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141982.1:37299471-37299494
ACATCCTTTTCTTTCCCACGGGGACTGAAA37299471AACTCAGGCACAATTTCTGCAACTGAAGACTATCCTAACCTATGCTAATCTTAC
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143370.1:4587369-4587392
ACATCCTTTTCTTTCCCACGGGGACTGAAA4587369AACTCAGGCACAATTTCTGCAACTGAAGACTATCCTAACCTATGCTAATCTTAC
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143387.1:4402993-4403016
ACATCCTGTTCTTTCCCACGGGGACTGAAA4402993AACTCAGGCACAATTTCTGCAACTGAAGACTATCCTATCCTATGCTAATCTAAC
Malus sylvestris genome assembly, chromosome: 13.
OU696515.1:4527450-4527473
ACATCCTTTTCTTTCCCACGGGGACTGAAA4527450AACTCAGGCACAATTTCTGCAACTGAAGACTATCCTAACCTATGCTAATCTTAC
Malus domestica genome assembly, chromosome: 13.
OU696689.1:4619890-4619913
ACATCCTTTTCTTTCCCACGGGGACTGAAA4619890AACTCAGGCACAATTTCTGCAACTGAAGACTATCCTAACCTATGCTAATCTTAC
Malus domestica genome assembly, chromosome: 13.
OU744554.1:4514577-4514600
ACATCCTTTTCTTTCCCACGGGGACTGAAA4514577AACTCAGGCACAATTTCTGCAACTGAAGACTATCCTAACCTATGCTAATCTTAC
Malus domestica genome assembly, chromosome: 13.
OU744965.1:4536273-4536296
ACATCCTTTTCTTTCCCACGGGGACTGAAA4536273AACTCAGGCACAATTTCTGCAACTGAAGACTATCCTAACCTATGCTAATCTTAC
Malus domestica genome assembly, chromosome: 13.
OU745003.1:4405113-4405136
ACATCCTTTTCTTTCCCACGGGGACTGAAA4405113AACTCAGGCACAATTTCTGCAACTGAAGACTATCCTAACCTATGCTAATCTTAC
Malus x robusta genome assembly, chromosome: 9.
OY720333.1:4538725-4538748
ACATCCTTTTCTTTCCCACGGGGACTGAAA4538725AACTCAGGCACAATTTCTGCAACTGAAGACTATCCTAACCTATGCTAATCTTAC
Malus hybrid cultivar cultivar Royalty chromosome 13.
CP141965.1:36383028-36383051
GTAAGATTAGCATAGGTTAGGATAGTCTTC36383028AGTTGCAGAAATTGTGCCTGAGTTTTTCAGTCCCCGTGGGAAAGAAAAGGATGT
Crataegus laevigata genome assembly, chromosome: 11.
OY756948.1:4950103-4950126
GATTCTGCATAGGATATTAGGATAGTCTTC4950103AGTTGCAGAAATTGTGCCTGAGTTTCATAGTCCCCGTGGTTAAAAAAATAAATA
Pyrus communis genome assembly, chromosome: 6.
OY757073.1:25813380-25813403
GTAAGATTAGCATATGATAGGATAGTCTTC25813380AGTTGCAGAAATTGTGCCTGAGTTTTTCAGTCCCCGTGGGAAAGAAAAGGATGT

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