GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:31:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EoEST0393 Oil palm mesocarp-tissue cDNA Entry Library Elaeis oleifera cDNA clone Mo17-328 5' similar to Metallothionein-like protein, mRNA sequence.
EL595362.1:240-260
TGTGGAACCAACTGCACCTGCGACCCCTGC240AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGAGGAAG
OPYF00064 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone 128-F07-T3.seq, mRNA sequence.
EL681022.1:233-253
TGTGGAACCAACTGCACCTGCGATCCCTGC233AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPYF00845 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone 190-C8-T3.seq, mRNA sequence.
EL681755.1:259-279
TGTGGAACCAACTGCACCTGCGATCCCTGC259AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPYF00919 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone 191-B1-T3.seq, mRNA sequence.
EL681829.1:233-253
TGTGGAACCAACTGCACCTGCGATCCCTGC233AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPYF01002 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone 192-A1-T3.seq, mRNA sequence.
EL681908.1:234-254
TGTGGAACCAACTGCACCTGCGATCCCTGC234AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPYF01021 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone 192-B5-T3.seq, mRNA sequence.
EL681927.1:233-253
TGTGGAACCAACTGCACCTGCGATCCCTGC233AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPYF01122 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone 197-C11-T3.seq, mRNA sequence.
EL682024.1:169-189
TGTGGAACCAACTGCACCTGCGATCCCTGC169AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPYF01259 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone 198-F6-T3.seq, mRNA sequence.
EL682160.1:245-265
TGTGGAACCAACTGCACCTGCGATCCCTGC245AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPYF01733 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone SUE2-F09-T3.seq, mRNA sequence.
EL682610.1:240-260
TGTGGAACCAACTGCACCTGCGATCCCTGC240AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPYF02789 Elaeis guineensis young flower 4-6 cm Elaeis guineensis cDNA clone MF12.seq, mRNA sequence.
EL683473.1:138-158
TGTGGAACCAACTGCACCTGCGATCCCTGC138AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF00313 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 119-C06-T3.seq, mRNA sequence.
EL684079.1:249-269
TGTGGAACCAACTGCACCTGCGATCCCTGC249AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF00614 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 122-D12-T3.seq, mRNA sequence.
EL684376.1:247-267
TGTGGAACCAACTGCACCTGCGATCCCTGC247AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF01069 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 131-C01-T3.seq, mRNA sequence.
EL684830.1:152-172
TGTGGAACCAACTGCACCTGCGATCCCTGC152AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGAGAAGG
OPMF01101 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 131-E09-T3.seq, mRNA sequence.
EL684862.1:241-261
TGTGGAACCAACTGCACCTGCGATCCCTGC241AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGGAAGGGAA
OPMF01168 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone 132-C04-T3.seq, mRNA sequence.
EL684928.1:195-215
TGTGGAACCAACTGCACCTGCGATCCCTGC195AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF01568 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6SG_S195.seq T3, mRNA sequence.
EL685329.1:260-280
TGTGGAACCAACTGCACCTGCGATCCCTGC260AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF01592 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6SG_S223.seq T3, mRNA sequence.
EL685353.1:169-189
TGTGGAACCAACTGCACCTGCGATCCCTGC169AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF01610 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6SG_S241.seq T3, mRNA sequence.
EL685371.1:248-268
TGTGGAACCAACTGCACCTGCGATCCCTGC248AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF01822 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6SG_S473.seq T3, mRNA sequence.
EL685582.1:194-214
TGTGGAACCAACTGCACCTGCGATCCCTGC194AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF01951 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6SG_S627.seq T3, mRNA sequence.
EL685711.1:248-268
TGTGGAACCAACTGCACCTGCGATCCCTGC248AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF01968 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6SG_S644.seq T3, mRNA sequence.
EL685728.1:252-272
TGTGGAACCAACTGCACCTGCGATCCCTGC252AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF02029 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6SG_S716.seq T3, mRNA sequence.
EL685788.1:301-321
TGTGGAACCAACTGCACCTGCGATCCCTGC301AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGACGCGCAG
OPMF02046 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6SG_S735.seq T3, mRNA sequence.
EL685805.1:247-267
TGTGGAACCAACTGCACCTGCGATCCCTGC247AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF02117 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6WK_W1085.seq T3, mRNA sequence.
EL685875.1:232-252
TGTGGAACCAACTGCACCTGCGATCCCTGC232AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF02140 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6WK_W1111.seq T3, mRNA sequence.
EL685898.1:231-251
TGTGGAACCAACTGCACCTGCGATCCCTGC231AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF02151 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6WK_W1123.seq T3, mRNA sequence.
EL685909.1:104-124
TGTGGAACCAACTGCACCTGCGATCCCTGC104AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF02254 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6WK_W360.seq T3, mRNA sequence.
EL686011.1:256-276
TGTGGAACCAACTGCACCTGCGATCCCTGC256AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF02436 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6WK_W581.seq T3, mRNA sequence.
EL686193.1:259-279
TGTGGAACCAACTGCACCTGCGATCCCTGC259AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF02508 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6WK_W794.seq T3, mRNA sequence.
EL686265.1:107-127
TGTGGAACCAACTGCACCTGCGATCCCTGC107AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPMF02585 Elaeis guineensis mature flower 26 cm Elaeis guineensis cDNA clone OPN6WK_W884.seq T3, mRNA sequence.
EL686342.1:244-264
TGTGGAACCAACTGCACCTGCGATCCCTGC244AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPVM00392 Elaeis guineensis shoot apex Elaeis guineensis cDNA clone 86-B07-T3.seq, mRNA sequence.
EL686786.1:260-280
TGTGGAACCAACTGCACCTGCGATCCCTGC260AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPVM00438 Elaeis guineensis shoot apex Elaeis guineensis cDNA clone 86-F05-T3.seq, mRNA sequence.
EL686832.1:405-425
TGTGGAACCAACTGCACCTGCGATCCCTGC405AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPVM00872 Elaeis guineensis shoot apex Elaeis guineensis cDNA clone OPN0XX_B2-4W.seq, mRNA sequence.
EL687253.1:219-239
TGTGGAACCAACTGCACCTGCGATCCCTGC219AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPVM00961 Elaeis guineensis shoot apex Elaeis guineensis cDNA clone OPN0XX_B39-7.seq, mRNA sequence.
EL687341.1:155-175
TGTGGAACCAACTGCACCTGCGATCCCTGC155AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPVM01516 Elaeis guineensis shoot apex Elaeis guineensis cDNA clone OPN0XX_C41-7S.seq, mRNA sequence.
EL687889.1:245-265
TGTGGAACCAACTGCACCTGCGATCCCTGC245AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPVM01769 Elaeis guineensis shoot apex Elaeis guineensis cDNA clone OPN0XX_D31-1.seq, mRNA sequence.
EL688139.1:247-267
TGTGGAACCAACTGCACCTGCGATCCCTGC247AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPR01402 Elaeis guineensis root Elaeis guineensis cDNA clone PLATE219-E12-T3.seq, mRNA sequence.
EL691367.1:239-259
TGTGGAACCAACTGCACCTGCGATCCCTGC239AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPR01416 Elaeis guineensis root Elaeis guineensis cDNA clone PLATE219-F3-T3.seq, mRNA sequence.
EL691381.1:28-48
ATTACCAACTGCACCTGCGATCCCTGC28AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
OPR02902 Elaeis guineensis root Elaeis guineensis cDNA clone OPVRXX_854.seq, mRNA sequence.
EL692861.1:372-392
TGTGGAACCAACTGCACCTGCGATCCCTGC372AACTGCAAATGAGACACAGAGGCCCTCAGAGAGAGAGAGAGAGAGGAAGGG
EoEST1356 Oil palm mesocarp-tissue cDNA Entry Library Elaeis oleifera cDNA clone Mo17-1394 5' similar to metallothionein-like protein, mRNA sequence.
EL930520.1:229-249
TGTGGAACCAACTGCACCTGCGACCCCTGC229AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
pOP-CNIP00637_EST_C_1_pSK_SK CNI (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNIP00637 5', mRNA sequence.
EY403680.1:259-279
TGTGGAACCAACTGCACCTGCGATCCCTGC259AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGGAAGGGAA
pOP-CNI01937_EST_C_1_pSK_SK CNI (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNI01937 5', mRNA sequence.
EY404439.1:5-25
CTGC5AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
pOP-EAP03162_EST_C_1_pBSK_SK EA (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EAP03162 5', mRNA sequence.
EY405854.1:252-272
TGTGGAACCAACTGCACCTGCGATCCCTGC252AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGGAAGGGAA
pOP-EAP00123_EST_C_1_pBSK_SK EA (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EAP00123 5', mRNA sequence.
EY407719.1:233-253
TGTGGAACCAACTGCACCTGCGATCCCTGC233AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
pOP-EO02235_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02235 5', mRNA sequence.
EY410161.1:263-283
TGTGGAACCAACTGCACCTGCGATCCCTGC263AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
pOP-EO02786_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02786 5', mRNA sequence.
EY410743.1:257-277
TGTGGAACCAACTGCACCTGCGATCCCTGC257AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
pOP-EO05053_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO05053 5', mRNA sequence.
EY411421.1:251-271
TGTGGAACCAACTGCACCTGCGATCCCTGC251AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
pOP-EO02125_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02125 5', mRNA sequence.
EY412475.1:252-272
TGTGGAACCAACTGCACCTGCGATCCCTGC252AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
pOP-EO06113_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO06113 5', mRNA sequence.
EY413162.1:263-283
TGTGGAACCAACTGCACCTGCGATCCCTGC263AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
Elaeis guineensis EST, clone (6lib)_isotig32667.
LM627860.1:288-308
TGTGGAACCAACTGCACCTGCGATCCCTGC288AACTGCAAATGAGACACAGAGGCCTCAAGAGAGAGAGAGAGAGAGGAAGGG
Cantharis flavilabris genome assembly, chromosome: 3.
OX424437.1:5427714-5427734
TAAACTGAATTCTTCATGAATTTTAAGAAT5427714AACTGCAAATGAGACACAGAGAGGTTTCCTTATTTTCTAAATAAATACTGG
Tridacna derasa genome assembly, chromosome: 1.
OY723414.1:49688836-49688856
CGAACCAGGCTTTACCGGTGATGACGAATC49688836AACTGCAAATGAGACACAGAGAGAAATTTACGCACCATTTGAATATGGCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACTGCAAATGAGACACAGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACTGCAAATGAGACACAGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
3.061 | 3.052 | search_plus_done; http://172.18.8.135:50400/match?q=AACTGCAAATGAGACACAGAG&k=0&no_gap=0&offset=0&limit=50
3.185 | 0.124 | search_minus_done; http://172.18.8.135:50400/match?q=CTCTGTGTCTCATTTGCAGTT&k=0&no_gap=0&offset=0&limit=0
3.185 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).