GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 08:57:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Daucus carota subsp. sativus cultivar DH1 chromosome 7.
CP093349.1:38994787-38994806
TATATAGAACTGGTTTTTTAGAGTACATAG38994787AACTGCTCCTTGGTCCAAAATTTGGGATGAAATACTTGCCATTGAGGCGG
Daucus carota isolate Kuroda chromosome 7.
CP125307.1:39057765-39057784
TATATAGAACTGGTTTTTTAGAGTACATAG39057765AACTGCTCCTTGGTCCAAAATTTGGGATGAAATACTTGCCATTGAGGCGG
Hippopus hippopus genome assembly, chromosome: 17.
OX328112.1:14189005-14189024
AGAGAAAAGGAGCAACTAGCTGTAACAGAC14189005AACTGCTCCTTGGTCCAAAATGTCTTCAAAAGCACATTACTGTTGGATGG
Micromys minutus genome assembly, chromosome: 21.
OZ004801.1:13084566-13084585
GCCTGCCCTGAAATAGTAATATGAGGATGG13084566TTTTGGACCAAGGAGCAGTTTTCATCTTGTTGAGGATACTAATCTTCACT
Erodium maritimum genome assembly, chromosome: 8.
OY997595.1:20786153-20786172
TTTTGGGAGGAACACCTGTTTTCCAGACTG20786153TTTTGGACCAAGGAGCAGTTAGAGAGGGAGCAGAGGAGGTAGTGTCCAAG
Ceriagrion tenellum genome assembly, chromosome: X.
OY720638.1:104698773-104698792
TGCCACTTGCTCCGGGCAGCAGCTTATATT104698773TTTTGGACCAAGGAGCAGTTTTCCAGATTGATGAATACTTTTCTTCTCTC
Tridacna derasa genome assembly, chromosome: 17.
OY723430.1:22801129-22801148
CCATCCAACAGTAATGTGCTTTTGAAGACA22801129TTTTGGACCAAGGAGCAGTTGTCTGTTACAGCTAGTTGCTCCTTTTCTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AACTGCTCCTTGGTCCAAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AACTGCTCCTTGGTCCAAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.142 | 0.134 | search_plus_done; http://172.18.8.135:50400/match?q=AACTGCTCCTTGGTCCAAAA&k=0&no_gap=0&offset=0&limit=50
0.172 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=TTTTGGACCAAGGAGCAGTT&k=0&no_gap=0&offset=0&limit=47
0.174 | 0.003 | cgi_end;

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