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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:33:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 1 from Patent WO9850558.
A83277.1:353-372
CCTCTCCCCGAAGATCTCCACACCGTCTCT353AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
Sequence 12 from patent US 6469149.
AR241300.1:353-372
CCTCTCCCCGAAGATCTCCACACCGTCTCT353AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
Sequence 4 from patent US 6630330.
AR405966.1:365-384
CCTCTCCCCGAAGATCTCCACACCGTCTCT365AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
Sequence 4 from Patent WO0210425.
AX374951.1:365-384
CCTCTCCCCGAAGATCTCCACACCGTCTCT365AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
Sequence 4 from Patent EP1498489.
CS017718.1:365-384
CCTCTCCCCGAAGATCTCCACACCGTCTCT365AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
Sequence 4 from Patent EP1820863.
CS694163.1:365-384
CCTCTCCCCGAAGATCTCCACACCGTCTCT365AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
JP 2004504850-A/2: Ascorbic Acid Production from Yeasts.
DL070805.1:365-384
CCTCTCCCCGAAGATCTCCACACCGTCTCT365AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
Sequence 4 from patent US 7579171.
GP549735.1:365-384
CCTCTCCCCGAAGATCTCCACACCGTCTCT365AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
21ACACMS_UP_010_D06_08MAR2004_042 Brassica napus 21ACACMS Brassica napus cDNA 5', mRNA sequence.
CX279629.1:331-350
CCTCTCCCCGAAGATCTCCACACCGTCTCT331AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
Brassica oleracea var. viridis mRNA, clone: KALE-028E21, 5' end sequence.
DK466363.1:322-341
CCTCTCCCCGAAGATCTCCACACCGTCTCT322AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
Brassica oleracea var. viridis mRNA, clone: KALE-044F11, 5' end sequence.
DK472490.1:333-352
CCTCTCCCCGAAGATCTCCACACCGTCTCT333AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
Brassica oleracea var. viridis mRNA, clone: KALE-109D06, 5' end sequence.
DK497317.1:349-368
CCTCTCCCCGAAGATCTCCACACCGTCTCT349AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
Brassica oleracea var. viridis mRNA, clone: KALE-119K11, 5' end sequence.
DK501305.1:349-368
CCTCTCCCCGAAGATCTCCACACCGTCTCT349AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
Brassica oleracea var. viridis mRNA, clone: KALE-137E21, 5' end sequence.
DK508056.1:322-341
CCTCTCCCCGAAGATCTCCACACCGTCTCT322AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
Brassica oleracea var. viridis mRNA, clone: KALE-153G06, 5' end sequence.
DK514197.1:340-359
CCTCTCCCCGAAGATCTCCACACCGTCTCT340AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
BNSCS3CT_UP_128_G09_09MAY2007_067 Brassica napus BNSCS3CT Brassica napus cDNA 5', mRNA sequence.
EV046828.1:340-359
CCTCTCCCCGAAGATCTCCACACCGTCTCT340AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
0096164 Brassica napus Bud library Brassica napus cDNA, mRNA sequence.
EV152893.1:419-438
CCTCTCCCCGAAGATCTCCACACCGTCTCT419AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_14286.
FX728106.1:388-407
CCTCTCCCGGAAGATCTCCACACGGTCTCT388AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
Brassica napus cultivar Xiang5A chromosome 18.
CP123893.1:19509044-19509063
CCTCTCCCCGAAGATCTCCACACCGTCTCT19509044AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
Brassica oleracea mRNA for L-galactono-1,4-lactone dehydrogenase.
Z97060.1:365-384
CCTCTCCCCGAAGATCTCCACACCGTCTCT365AACTGGAGTGGTACTCACGAGGTCCAGACCAGGAACTTTAACCAGCCGGA
Pimpla rufipes genome assembly, chromosome: 1.
OZ010630.1:21837074-21837093
GGAGGACGGATTCGCAGGGCGAAATTTTGA21837074AACTGGAGTGGTACTCACGAATGTGTTATACGAATTTTGCATATCACGTG
BOT01-42G23TR BOT01 Brassica oleracea genomic clone BOT01-42G23, genomic survey sequence.
FI705187.1:398-417
TCCGGCTGGTTAAAGTTCCTGGTCTGGACC398TCGTGAGTACCACTCCAGTTAGAGACGGTGTGGAGATCTTCGGGGAGAGG
BOT01-42G24TR BOT01 Brassica oleracea genomic clone BOT01-42G24, genomic survey sequence.
FI705698.1:399-418
TCCGGCTGGTTAAAGTTCCTGGTCTGGACC399TCGTGAGTACCACTCCAGTTAGAGACGGTGTGGAGATCTTCGGGGAGAGG
BOT01-44D15TR BOT01 Brassica oleracea genomic clone BOT01-44D15, genomic survey sequence.
FI705931.1:355-374
TCCGGCTTTTTAAAGTTCCTGGTCTGGACC355TCGTGAGTACCACTCCAGTTAGAGACGGTGTGGAGATCTTCGGGGAGAGG
BOT01-111G18TF BOT01 Brassica oleracea genomic clone BOT01-111G18, genomic survey sequence.
FI752585.1:100-119
TCCGGCTGGTTAAAGTTCCTGGTCTGGACC100TCGTGAGTACCACTCCAGTTAGAGACGGTGTGGAGATCTTCGGGGAGAGG
BOT01-119E11TF BOT01 Brassica oleracea genomic clone BOT01-119E11, genomic survey sequence.
FI757333.1:398-417
TCCGGCTGGTTAAAGTTCCTGGTCTGGACC398TCGTGAGTACCACTCCAGTTAGAGACGGTGTGGAGATCTTCGGGGAGAGG
Brassica napus genome assembly, chromosome: C03.
HG994367.1:55131141-55131160
TCCGGCTGGTTAAAGTTCCTGGTCTGGACC55131141TCGTGAGTACCACTCCAGTTAGAGACGGTGTGGAGATCTTCGGGGAGAGG
Brassica rapa genome, scaffold: A06.
LR031569.1:10929307-10929326
TCCGGCTGGTTAAAGTTCCTGGTCTGGACC10929307TCGTGAGTACCACTCCAGTTAGAGACCGTGTGGAGATCTTCCGGGAGAGG
Brassica oleracea HDEM genome, scaffold: C3.
LR031872.1:55791007-55791026
TCCGGCTGGTTAAAGTTCCTGGTCTGGACC55791007TCGTGAGTACCACTCCAGTTAGAGACGGTGTGGAGATCTTCGGGGAGAGG
Brassica rapa genome assembly, chromosome: A06.
LS974622.2:11777285-11777304
TCCGGCTGGTTAAAGTTCCTGGTCTGGACC11777285TCGTGAGTACCACTCCAGTTAGAGACCGTGTGGAGATCTTCCGGGAGAGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACTGGAGTGGTACTCACGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACTGGAGTGGTACTCACGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.812 | 0.804 | search_plus_done; http://172.18.8.135:50400/match?q=AACTGGAGTGGTACTCACGA&k=0&no_gap=0&offset=0&limit=50
1.092 | 0.280 | search_minus_done; http://172.18.8.135:50400/match?q=TCGTGAGTACCACTCCAGTT&k=0&no_gap=0&offset=0&limit=29
1.098 | 0.006 | cgi_end;

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