GGGenome Help | English

データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 12:33:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Capsicum annuum Takanotsume DNA, chromosome 7, sequence.
AP026702.1:266298607-266298628
TTTATACATTGGACACTCCAGGGAACTTTC266298607AACTGGCCTCAGTAAATTCTGCATTATATATATATATATATATATATATATA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 7.
CP124725.1:269887791-269887812
TTTATACATTGGACACTCCAGGGAACTTTC269887791AACTGGCCTCAGTAAATTCTGCATTATATATATATATATATATATATATATA
KS08017A11 KS08 Capsicum annuum cDNA, mRNA sequence.
BM068108.1:553-574
TATATATATATATATATATATATATATAAT553GCAGAATTTACTGAGGCCAGTTGAAAGTTC
TSA: Capsicum annuum MA_MegaContig_14058, mRNA sequence.
JW157784.1:4823-4844
TATATATATATATATATATATATATATAAT4823GCAGAATTTACTGAGGCCAGTTGAAAGTTCCCTGGAGTGTCCAATGTATAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACTGGCCTCAGTAAATTCTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACTGGCCTCAGTAAATTCTGC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.164 | 0.155 | search_plus_done; http://172.18.8.135:50400/match?q=AACTGGCCTCAGTAAATTCTGC&k=0&no_gap=0&offset=0&limit=50
0.283 | 0.119 | search_minus_done; http://172.18.8.135:50400/match?q=GCAGAATTTACTGAGGCCAGTT&k=0&no_gap=0&offset=0&limit=48
0.285 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).