GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-28 11:30:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Vigna angularis mRNA, clone: VEPS02F12.
HX939331.1:123-142
CCCCCCCACATCAGCCCCACTTCACCCCCC123AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS02O01.
HX939524.1:145-164
CCCCCCCACATCAGCCCCACTTCACCCCCC145AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS03D20.
HX939657.1:127-146
CCCCCCCACATCAGCCCCACTTCACCCCCC127AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS03O04.
HX939894.1:145-164
CCCCCCCACATCAGCCCCACTTCACCCCCC145AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS04I04.
HX940120.1:126-145
CCCCCCCACATCAGCCCCACTTCACCCCCC126AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS06L10.
HX940921.1:141-160
CCCCCCCACATCAGCCCCACTTCACCCCCC141AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS07B10.
HX941048.1:73-92
CCCCCCCACATCAGCCCCACTTCACCCCCC73AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS07G17.
HX941168.1:85-104
CCCCCCCACATCAGCCCCACTTCACCCCCC85AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS07I21.
HX941217.1:240-259
CCCCCCCACATCAGCCCCACTTCACCCCCC240AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS07O16.
HX941354.1:93-112
CCCCCCCACATCAGCCCCACTTCACCCCCC93AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS08O02.
HX941708.1:137-156
CCCCCCCACATCAGCCCCACTTCACCCCCC137AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS09A20.
HX941772.1:141-160
CCCCCCCACATCAGCCCCACTTCACCCCCC141AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS10_C21.
HX942175.1:139-158
CCCCCCCACATCAGCCCCACTTCACCCCCC139AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS10_F20.
HX942242.1:144-163
CCCCCCCACATCAGCCCCACTTCACCCCCC144AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS10_G21.
HX942267.1:130-149
CCCCCCCACATCAGCCCCACTTCACCCCCC130AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS10_O15.
HX942447.1:99-118
CCCCCCCACATCAGCCCCACTTCACCCCCC99AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS11_F02.
HX942596.1:145-164
CCCCCCCACATCAGCCCCACTTCACCCCCC145AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS11_J08.
HX942690.1:145-164
CCCCCCCACATCAGCCCCACTTCACCCCCC145AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS11_K11.
HX942714.1:145-164
CCCCCCCACATCAGCCCCACTTCACCCCCC145AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VEPS11_L01.
HX942727.1:130-149
CCCCCCCACATCAGCCCCACTTCACCCCCC130AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VES02B07.
HX942871.1:137-156
CCCCCCCACATCAGCCCCACTTCACCCCCC137AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VES02N12.
HX943160.1:127-146
CCCCCCCACATCAGCCCCACTTCACCCCCC127AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VES07G17.
HX944881.1:379-398
CCCCCCCACATCAGCCCCACTTCACCCCCC379AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VES14J05.
HX947581.1:256-275
CCCCCCCACATCAGCCCCACTTCACCCCCC256AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VES15C23.
HX947813.1:123-142
CCCCCCCACATCAGCCCCACTTCACCCCCC123AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
Vigna angularis mRNA, clone: VES20N14.
HX949943.1:145-164
CCCCCCCACATCAGCCCCACTTCACCCCCC145AACTTACCCACCTGCAAACGCCCCTCACCACCACCACCACCATCACCACC
seq5491 091111_plate_26h20.b1 Common bean full-length cDNA Library Phaseolus vulgaris cDNA 5', mRNA sequence.
JK041947.1:133-152
CACTCTTCCATCAGCCCCACTTCACCCCCC133AACTTACCCACCTGCAAACGCCCCTCACCACCCCCACCCCCACCACCACC
P.vulgaris mRNA for prolin-rich protein (PvPRP1).
X60391.1:122-141
CACTCTTCCATCAGCCCCACTTCACCCCCC122AACTTACCCACCTGCAAACGCCCCTCACCACCCCCACCCCCACCACCACC
Anania crocealis genome assembly, chromosome: 2.
OX438881.1:19349172-19349191
CACTGTTTAAGTAATGTAAGTACGATCGAC19349172AACTTACCCACCTGCAAACGTAGACAGTATTTTGGACAGATCATGTTTTA
Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
AP015034.1:12257034-12257053
GGTGGTGATGGTGGTGGTGGTGGTGAGGGG12257034CGTTTGCAGGTGGGTAAGTTGGGGGGTGAAGTGGGGCTGATGTGGGGGGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AACTTACCCACCTGCAAACG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AACTTACCCACCTGCAAACG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.420 | 2.411 | search_plus_done; http://172.18.8.135:50400/match?q=AACTTACCCACCTGCAAACG&k=0&no_gap=0&offset=0&limit=50
2.456 | 0.036 | search_minus_done; http://172.18.8.135:50400/match?q=CGTTTGCAGGTGGGTAAGTT&k=0&no_gap=0&offset=0&limit=21
2.457 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).