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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 08:04:24, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica napus genome assembly, chromosome: C08.
HG994372.1:10286216-10286235
AATTTAATAAATCTTTGTAATATATTAAGC10286216AACTTCCCCGTGAGGTATAAGCTACACAAATCATGTCTGAATAAATATAG
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:10435050-10435069
AATTTAATAAATCTTTGTAATATATTAAGC10435050AACTTCCCCGTGAGGTATAAGCTACAGAAATCATGTCTGAATAAATATAG
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:10447705-10447724
AATTTAATAAATCTTTGTAATATATTAAGC10447705AACTTCCCCGTGAGGTATAAGCTACACAAATCATGTCTGAATAAATATAG
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE01a005E02_SP6.
AM057686.1:337-356
CTATATTTATTCAGACATGATTTGTGTAGC337TTATACCTCACGGGGAAGTTGCTTAATATATTACAAAGATTTATT
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:43938306-43938325
CTATATTTATTCAGACATGATTTGTGTAGC43938306TTATACCTCACGGGGAAGTTGCTTAATATATTACAAAGATTTATTAAATT
Brassica napus cultivar Xiang5A chromosome 15.
CP123890.1:43950970-43950989
CTATATTTATTCAGACATGATTTCTGTAGC43950970TTATACCTCACGGGGAAGTTGCTTAATATATTACAAAGATTTATTAAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACTTCCCCGTGAGGTATAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACTTCCCCGTGAGGTATAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.333 | 0.324 | search_plus_done; http://172.18.8.135:50400/match?q=AACTTCCCCGTGAGGTATAA&k=0&no_gap=0&offset=0&limit=50
0.424 | 0.091 | search_minus_done; http://172.18.8.135:50400/match?q=TTATACCTCACGGGGAAGTT&k=0&no_gap=0&offset=0&limit=47
0.426 | 0.002 | cgi_end;

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