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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 14:30:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Trifolium pratense cDNA clone:RCE27795.
BB921610.1:332-353
ATCCACATCGGCCTCACGAATCATCTCATC332AACTTCTTCGTCTGTCAGCTTCTCACCGAGATTTGTCATGACATGGCGGAGC
Trifolium pratense cDNA clone:RCE29957.
BB922624.1:432-453
ATCCACATCGGCCTCACGAATCATCTCATC432AACTTCTTCGTCTGTCAGCTTCTCACCGAGATTTGTCATGACATGGCGGAGC
LJGAW11TO JCVI-LJ1 Lotus japonicus cDNA 3', mRNA sequence.
GO015925.1:405-426
ATCAACATCAGCCTCGCGGATCATCTCATC405AACTTCTTCGTCTGTCAGCTTCTCACCAAGGTTGGTCATGACATGGCGGAGC
CAABF43TF ICC1882 field drought stressed root cDNA library Cicer arietinum cDNA clone CAABF43TF 5', mRNA sequence.
GR392603.1:467-488
ATCAACATCAGCCTCGCGAATCATCTCATC467AACTTCTTCGTCTGTCAGCTTCTCACCGAGATTCGTCATAACATGGCGG
ICC4958_Field_CAAAT68TF ICC4958 field drought stressed root cDNA library Cicer arietinum cDNA clone ICC4958_Field_CAAAT68TF 5', mRNA sequence.
GR398139.1:497-518
ATCAACATCAGCCTCGCGAATCATCTCATC497AACTTCTTCGTCTGTCAGCTTCTCACCGAGATTCGTCATAACATGGCGGAGC
AR2-1_8048-042_B06 Chickpea drought stressed cDNA SSH library AR2 Cicer arietinum cDNA, mRNA sequence.
HO064317.1:474-495
ATCAACATCAGCCTCGCGAATCATCTCATC474AACTTCTTCGTCTGTCAGCTTCTCACCGAGATTCGTCATAACATGGGCGGAG
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-16.
CP023128.1:16832264-16832285
ATCACCATCAGCCTCGCGAATCATCTCATC16832264AACTTCTTCGTCTGTCAGCTTCTCACCAAGATTTGTCATGACATGGCGGAGC
Cicer arietinum chromosome Ca2.
CP039332.1:11000794-11000815
ATCAACATCAGCCTCGCGAATCATCTCATC11000794AACTTCTTCGTCTGTCAGCTTCTCACCGAGATTCGTCATAACATGGCGGAGC
Cicer arietinum chromosome Ca2.
CP040767.1:11000790-11000811
ATCAACATCAGCCTCGCGAATCATCTCATC11000790AACTTCTTCGTCTGTCAGCTTCTCACCGAGATTCGTCATAACATGGCGGAGC
Trifolium repens isolate ACLI19 chromosome 03_Occ.
CP125840.1:11907526-11907547
GTCAACATCGGCCTCACGAATCATCTCATC11907526AACTTCTTCGTCTGTCAGCTTCTCACCGAGATTTGTCATGACATGGCGGAGC
Trifolium repens isolate ACLI19 chromosome 03_Pall.
CP125841.1:13758923-13758944
ATCAACATCGGCCTCACGAATCATCTCATC13758923AACTTCTTCGTCTGTCAGCTTCTCACCAAGATTTGTCATGACATGGCGGAGC
Coregonus sp. 'balchen' genome assembly, chromosome: 12.
LR778264.1:50551380-50551401
AATAAACCTAGCCAGAGAATCAAAGGGAGA50551380GAAGCTGACAGACGAAGAAGTTGAGGAGTGAGTAAAGATGTATTACAGTATT
Sequence 306 from patent US 9163255.
HL270017.1:361-382
GCTCCGCCATGTTATGACGAATCTCGGTGA361GAAGCTGACAGACGAAGAAGTTGATGAGATGATTCGCGAGGCTGATGTTGAT
Sequence 306 from Patent WO2011024207.
JA857233.1:361-382
GCTCCGCCATGTTATGACGAATCTCGGTGA361GAAGCTGACAGACGAAGAAGTTGATGAGATGATTCGCGAGGCTGATGTTGAT
Ljirnpest20-634-g12 Ljirnp Lambda HybriZap two-hybrid library Lotus japonicus cDNA clone LP634-20-g12 5' similar to mRNA for calmodulin (AI967619), mRNA sequence.
AW164147.1:165-186
GCTCCGCCATGTCATGACCAACCTTGGTGA165GAAGCTGACAGACGAAGAAGTTGATGAGATGATCCGCGAGGCTGATGTTGAT
Trifolium pratense cDNA clone:RCE01603.
BB903763.1:388-409
GCTCCGCCATGTCATGACAAATCTCGGTGA388GAAGCTGACAGACGAAGAAGTTGATGAGATGATTCGTGAGGCCGATGTGGAT
Trifolium pratense cDNA clone:RCE28283.
BB922037.1:394-415
GCTCCGCCATGTCATGACAAATCTCGGTGA394GAAGCTGACAGACGAAGAAGTTGATGAGATGATTCGTGAGGCCGATGTGGAT
Trifolium pratense cDNA clone:RCE32454.
BB924184.1:405-426
GCTCCGCCATGTCATGACAAATCTCGGTGA405GAAGCTGACAGACGAAGAAGTTGATGAGATGATTCGTGAGGCCGATGTGGAT
IpCGBr3_1_E01_21 Ictalurus punctatus Brain1 microsatellite enriched Ictalurus punctatus cDNA clone IpCGBr3_1_E01_21_27Sep00_005 5', mRNA sequence.
BM495639.1:505-526
ACTGCGTCACGTCATGACTAACCTCNGTGA505GAAGCTGACAGACGAAGAAGTTGATGAGATGATT
AMM1153 Ammopiptanthus mongolicus leaf cDNA library Ammopiptanthus mongolicus cDNA, mRNA sequence.
EL680396.1:377-398
GCTCCGCCATGTCATGACTAACCTTGGTGA377GAAGCTGACAGACGAAGAAGTTGATGAGATGATCCGCGAGGCTGATGTTGAT
mh1_0033_H11 Drought-stressed chickpea leave library Cicer arietinum cDNA clone mh1_0033_H11 5', mRNA sequence.
FE673289.1:407-428
GCTCCGCCATGTTATGACGAATCTCGGTGA407GAAGCTGACAGACGAAGAAGTTGATGAGATGATTCGCGAGGCTGATGTTGAT
Trifolium repens mRNA, clone: WCC18e06_083, unspecified EST.
FY460333.1:396-417
GCTCCGCCATGTCATGACAAATCTCGGTGA396GAAGCTGACAGACGAAGAAGTTGATGAGATGATTCGTGAGGCCGATGTTGAC
Trifolium repens mRNA, clone: WCC25p20_032, unspecified EST.
FY463097.1:392-413
GCTCCGCCATGTCATGACAAATCTTGGTGA392GAAGCTGACAGACGAAGAAGTTGATGAGATGATTCGTGAGGCCGATGTTGAT
CAABI13TF ICC1882 field drought stressed root cDNA library Cicer arietinum cDNA clone CAABI13TF 5', mRNA sequence.
GR392790.1:419-440
GCTCCGCCATGTTATGACGAATCTCGGTGA419GAAGCTGACAGACGAAGAAGTTGATGAGATGATTCGCGAGGCTGATGTTGAT
CaF1_JIE_05_B_08 Early immune responsive suppression subtracted cDNA libraries of Chickpea (Cicer arietinum cv. JG-62) wilt Cicer arietinum cDNA clone CaF1_JIE_05_B_08, mRNA sequence.
GR912038.1:385-406
GCTCCGCCATGTTATGACGAATCTCGGTGA385GAAGCTGACAGACGAAGAAGTTGATGAGATGATTCGCGAGGCTGATGTTGAT
BULK1-1_P5_D11 Chickpea drought stressed cDNA SSH library BULK1 Cicer arietinum cDNA, mRNA sequence.
HO067546.1:163-184
GCTCCGCCATGTTATGACGAATCTCGGTGA163GAAGCTGACAGACGAAGAAGTTGATGAGATGATTCGCGAGGCTGATGTTGAT
mh-2a_0012_C11 Chickpea leave library Cicer arietinum cDNA clone mh-2a_0012_C11 5', mRNA sequence.
HS109383.1:423-444
GCTCCGCCATGTTATGACGAATCTCGGTGA423GAAGCTGACAGACGAAGAAGTTGATGAGATGATTCGCGAGGCTGATGTTGAT
Am008_C01 Ammopiptanthus mongolicus cold- and drought-responsive library Ammopiptanthus mongolicus cDNA clone SDQ008_C01 5', mRNA sequence.
JZ389038.1:448-469
GCTCCGCCATGTCATGACTAACCTTGGTGA448GAAGCTGACAGACGAAGAAGTTGATGAGATGATCCGCGAGGCTGATGTTGAT
Am014_F09 Ammopiptanthus mongolicus cold- and drought-responsive library Ammopiptanthus mongolicus cDNA clone SDQ014_F09 5', mRNA sequence.
JZ389491.1:454-475
GCTCCGCCATGTCATGACTAACCTTGGTGA454GAAGCTGACAGACGAAGAAGTTGATGAGATGATCCGCGAGGCTGATGTTGAT
TSA: Thermobia domestica DMPC15568833 mRNA sequence.
JT501956.1:3-24
GA3GAAGCTGACAGACGAAGAAGTTGAGCAACTATTATCAGGTCAGGAGGACTCT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:7781423-7781444
GCTCCGCCATGTCATGACCAACCTTGGTGA7781423GAAGCTGACAGACGAAGAAGTTGATGAGATGATCCGCGAGGCTGATGTTGAT
Lotus japonicus clone JCVI-FLLj-21C24 unknown mRNA.
BT145847.1:429-450
GCTCCGCCATGTCATGACCAACCTTGGTGA429GAAGCTGACAGACGAAGAAGTTGATGAGATGATCCGCGAGGCTGATGTTGAT
Trifolium subterraneum genome assembly, chromosome: 6.
OX637466.1:40500904-40500925
GCTCCGCCATGTCATGACAAATCTCGGTGA40500904GAAGCTGACAGACGAAGAAGTTGATGAGATGATTCGTGAGGCCGATGTTGAT
Cicer arietinum mRNA for CaM protein.
Y09853.1:440-461
GCTCCGCCATGTTATGACGAATCTCGGTGA440GAAGCTGACAGACGAAGAAGTTGATGAGATGATTCGCGAGGCTGATGTTGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AACTTCTTCGTCTGTCAGCTTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AACTTCTTCGTCTGTCAGCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.524 | 0.516 | search_plus_done; http://172.18.8.135:50400/match?q=AACTTCTTCGTCTGTCAGCTTC&k=0&no_gap=0&offset=0&limit=50
1.658 | 1.133 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGCTGACAGACGAAGAAGTT&k=0&no_gap=0&offset=0&limit=39
1.672 | 0.015 | cgi_end;

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