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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-15 15:42:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica napus cultivar Xiang5A chromosome 14.
CP123889.1:26891728-26891747
CTTGTCTCTTGTCCTCCGACCATTCTTTGT26891728AAGAACCTATGCCTAGGTGCTGCGTGATGGCGTCTAAAACGTCGGTGTGA
Brassica rapa genome, scaffold: A04.
LR031576.1:20070428-20070447
CTTGTCTCTTGTCCTCTGACCATTCTTTGT20070428AAGAACCTATGCCTAGGTGCTGCGTGATCGCGTCTAAAACATCGGTGTGA
Brassica rapa genome assembly, chromosome: A04.
LS974620.2:20489271-20489290
CTTGTCTCTTGTCCTCTGACCATTCTTTGT20489271AAGAACCTATGCCTAGGTGCTGCGTGATCGCGTCTAAAACATCGGTGTGA
JP 1994090766-A/1: gDNA encoding phosphoenol pyruvate carboxylase.
E07106.1:3820-3839
TCACACCGATGTTTTAGACGCGATCACGCA3820GCACCTAGGCATAGGTTCTTACAAAGAATGGTCAGAGGACAAGAGACAAG
JP 1994090766-A/2: cDNA encoding phosphoenol pyruvate carboxylase.
E07107.1:1405-1424
TCACACCGATGTTTTAGACGCGATCACGCA1405GCACCTAGGCATAGGTTCTTACAAAGAATGGTCAGAGGACAAGAGACAAG
Sequence 49366 from Patent WO2008034648.
FB830093.1:1405-1424
TCACACCGATGTTTTAGACGCGATCACGCA1405GCACCTAGGCATAGGTTCTTACAAAGAATGGTCAGAGGACAAGAGACAAG
Sequence 49400 from Patent WO2008034648.
FB830127.1:1392-1411
TCACACCGATGTTTTAGACGCGATCACGCA1392GCACCTAGGCATAGGTTCTTACAAAGAATGGTCAGAGGACAAGAGACAAG
Sequence 49404 from Patent WO2008034648.
FB830131.1:1008-1027
TCACACCGACGTTTTAGACGCCATCACGCA1008GCACCTAGGCATAGGTTCTTACAAAGAATGGTCGGAGGACAAGAGACAAG
Sequence 61693 from Patent WO2008034648.
FB842420.1:1405-1424
TCACACCGATGTTTTAGACGCGATCACGCA1405GCACCTAGGCATAGGTTCTTACAAAGAATGGTCAGAGGACAAGAGACAAG
Sequence 61727 from Patent WO2008034648.
FB842454.1:1392-1411
TCACACCGATGTTTTAGACGCGATCACGCA1392GCACCTAGGCATAGGTTCTTACAAAGAATGGTCAGAGGACAAGAGACAAG
Sequence 61731 from Patent WO2008034648.
FB842458.1:1008-1027
TCACACCGACGTTTTAGACGCCATCACGCA1008GCACCTAGGCATAGGTTCTTACAAAGAATGGTCGGAGGACAAGAGACAAG
Sequence 49366 from Patent EP2090662.
HB700152.1:1405-1424
TCACACCGATGTTTTAGACGCGATCACGCA1405GCACCTAGGCATAGGTTCTTACAAAGAATGGTCAGAGGACAAGAGACAAG
Sequence 49400 from Patent EP2090662.
HB700186.1:1392-1411
TCACACCGATGTTTTAGACGCGATCACGCA1392GCACCTAGGCATAGGTTCTTACAAAGAATGGTCAGAGGACAAGAGACAAG
Sequence 49404 from Patent EP2090662.
HB700190.1:1008-1027
TCACACCGACGTTTTAGACGCCATCACGCA1008GCACCTAGGCATAGGTTCTTACAAAGAATGGTCGGAGGACAAGAGACAAG
Sequence 61693 from Patent EP2090662.
HB712479.1:1405-1424
TCACACCGATGTTTTAGACGCGATCACGCA1405GCACCTAGGCATAGGTTCTTACAAAGAATGGTCAGAGGACAAGAGACAAG
Sequence 61727 from Patent EP2090662.
HB712513.1:1392-1411
TCACACCGATGTTTTAGACGCGATCACGCA1392GCACCTAGGCATAGGTTCTTACAAAGAATGGTCAGAGGACAAGAGACAAG
Sequence 61731 from Patent EP2090662.
HB712517.1:1008-1027
TCACACCGACGTTTTAGACGCCATCACGCA1008GCACCTAGGCATAGGTTCTTACAAAGAATGGTCGGAGGACAAGAGACAAG
Sequence 174955 from Patent EP2090662.
HB825741.1:1405-1424
TCACACCGATGTTTTAGACGCGATCACGCA1405GCACCTAGGCATAGGTTCTTACAAAGAATGGTCAGAGGACAAGAGACAAG
Sequence 174989 from Patent EP2090662.
HB825775.1:1392-1411
TCACACCGATGTTTTAGACGCGATCACGCA1392GCACCTAGGCATAGGTTCTTACAAAGAATGGTCAGAGGACAAGAGACAAG
Sequence 174993 from Patent EP2090662.
HB825779.1:1008-1027
TCACACCGACGTTTTAGACGCCATCACGCA1008GCACCTAGGCATAGGTTCTTACAAAGAATGGTCGGAGGACAAGAGACAAG
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_5297.
FX726336.1:1799-1818
TCACACCGACGTTTTAGACGCCATCACGCA1799GCACCTAGGCATAGGTTCTTACAAAGAATGGTCGGAGGACAAGAGACAAG
Brassica napus PE3-PEPCase gene for phosphoenolpyruvate carboxylase, complete cds.
D13987.1:3820-3839
TCACACCGATGTTTTAGACGCGATCACGCA3820GCACCTAGGCATAGGTTCTTACAAAGAATGGTCAGAGGACAAGAGACAAG
Brassica napus phosphoenolpyruvate carboxylase mRNA, partial cds.
DQ093826.1:1007-1026
TCACACCGACGTTTTAGACGCCATCACGCA1007GCACCTAGGCATAGGTTCTTACAAAGAATGGTCGGAGGACAAGAGACAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAGAACCTATGCCTAGGTGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGAACCTATGCCTAGGTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.346 | 0.337 | search_plus_done; http://172.18.8.135:50400/match?q=AAGAACCTATGCCTAGGTGC&k=0&no_gap=0&offset=0&limit=50
0.845 | 0.499 | search_minus_done; http://172.18.8.135:50400/match?q=GCACCTAGGCATAGGTTCTT&k=0&no_gap=0&offset=0&limit=47
0.858 | 0.013 | cgi_end;

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