GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 10:35:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Odontocerum albicorne genome assembly, chromosome: 8.
OX463846.1:42354776-42354795
AGTTAACACTGTTGACAAAGATCATTATTG42354776AAGAAGACCGAGACAGAGGCTTTTAGATAACATGCACCAAGTACTTAAAA
Ha_mx0_33h03_SP6 Lobster Multiple Tissues, Normalized Homarus americanus cDNA clone Ha_mx0_33h03 5' similar to emb|CAF92996.1| unnamed protein product - Tetraodon nigroviridis. Score = 71.6 bits (174)
CN950399.1:16-35
CCTCCTGCTGCTCCT16GCCTCTGTCTCGGTCTTCTTCACTTAACTCACACCACAAGACGTTAATTA
Ha_mx0_33h04_SP6 Lobster Multiple Tissues, Normalized Homarus americanus cDNA clone Ha_mx0_33h04 5' similar to emb|CAF92996.1| unnamed protein product - Tetraodon nigroviridis. Score = 33.5 bits (75),
CN950400.1:19-38
AATCCTCCTGCTGCTCCT19GCCTCTGTCTCGGTCTTCTTCACTTAACTCACACCACAAGACGTTAATTA
Daucus carota subsp. sativus cultivar DH1 chromosome 6.
CP093348.1:37765015-37765034
GGAGGTTTCTCATGAGGAGCGCGTCGAAGG37765015GCCTCTGTCTCGGTCTTCTTGCCGCTAGGAGTTGCCATTCGGCCGCCTGC
Daucus carota isolate Kuroda chromosome 6.
CP125306.1:42138232-42138251
GGAGGTTTCTCATGAGGAGCGCGTCGAAGG42138232GCCTCTGTCTCGGTCTTCTTGCCGCTAGGAGTTGCCATTCGGCCGCCTGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAGAAGACCGAGACAGAGGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGAAGACCGAGACAGAGGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.193 | 0.184 | search_plus_done; http://172.18.8.135:50400/match?q=AAGAAGACCGAGACAGAGGC&k=0&no_gap=0&offset=0&limit=50
0.365 | 0.172 | search_minus_done; http://172.18.8.135:50400/match?q=GCCTCTGTCTCGGTCTTCTT&k=0&no_gap=0&offset=0&limit=49
0.368 | 0.003 | cgi_end;

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