GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 01:22:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Cannabis sativa PK04485.1_1.CasaPuKu mRNA sequence.
JP450128.1:424-443
TAATGGCAAATAGCTTATCTTCTCTTAAAC424AAGAGCTGGAACGAACAAAGCAAGAGCTTAGACAATTGAAATACCGGGAA
TSA: Humulus lupulus var. lupulus mRNA, contig: comp295787_c0_seq2.
LA658960.1:938-957
TAATGGCAAATAGCTTATCTTCTCTTAAAC938AAGAGCTGGAACGAACAAAGCAAGAGCTTCGACTATTGAAAGACCGGGAA
Humulus lupulus genome assembly, chromosome: X.
OY720650.1:203156879-203156898
TTCCCGGTCTTTCAATAGTCGAAGCTCTTG203156879CTTTGTTCGTTCCAGCTCTTGTTTAAGAGAAGATAAGCTATTTGCCATTA
Brachypalpus laphriformis genome assembly, chromosome: 1.
OX246753.1:172267390-172267409
ATGACGAGATAATTTAATATAAAGTACACT172267390CTTTGTTCGTTCCAGCTCTTGCTCTAGAAACTCATTAAATCTAGTTTTGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAGAGCTGGAACGAACAAAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGAGCTGGAACGAACAAAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.139 | 0.130 | search_plus_done; http://172.18.8.135:50400/match?q=AAGAGCTGGAACGAACAAAG&k=0&no_gap=0&offset=0&limit=50
0.166 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=CTTTGTTCGTTCCAGCTCTT&k=0&no_gap=0&offset=0&limit=48
0.167 | 0.001 | cgi_end;

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