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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-12-15 14:49:46, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arvicola amphibius genome assembly, chromosome: 7.
LR862386.1:31158878-31158897
CAGGACAATGAAGCTTGCTCGCTTGGAGAC31158878AAGAGGGGAAAATGGGAAGAACTCAACCACGTTCAGAGTTTGAGTTTGGG
Acomys russatus genome assembly, chromosome: 25.
LR877236.1:24863369-24863388
ACCCTTGGGGGTCTCCCCTCTTCTGAGAAG24863369AAGAGGGGAAAATGGGAAGAGGAGGCAGGGTCATGAGGGTGGGACTGGGA
Heterocephalus glaber genome assembly, chromosome: 12.
OX090920.1:86233649-86233668
GAAGAGGAAAGGGTAAATAAAGGAACAGGA86233649AAGAGGGGAAAATGGGAAGAATTCAACTTACAGCATCAGGAGTAGATTTA
Heterocephalus glaber genome assembly, chromosome: 14.
OZ001079.1:86277852-86277871
GAAGAGGAAAGGGTAAATAAAGGAACAGGA86277852AAGAGGGGAAAATGGGAAGAATTCAACTTACAGCATCAGGAGTAGATTTA
Heterocephalus glaber genome assembly, chromosome: 14.
OZ001122.1:86882525-86882544
GAAGAGGAAAGGGTAAATAAAGGAACAGGA86882525AAGAGGGGAAAATGGGAAGAATTCAACTTACAGCATCAGGAGTAGATTTA
Heterocephalus glaber genome assembly, chromosome: 13.
OZ179181.1:86277852-86277871
GAAGAGGAAAGGGTAAATAAAGGAACAGGA86277852AAGAGGGGAAAATGGGAAGAATTCAACTTACAGCATCAGGAGTAGATTTA
Heterocephalus glaber genome assembly, chromosome: 13.
OZ179212.1:86882525-86882544
GAAGAGGAAAGGGTAAATAAAGGAACAGGA86882525AAGAGGGGAAAATGGGAAGAATTCAACTTACAGCATCAGGAGTAGATTTA
Acomys minous genome assembly, chromosome: 19.
OZ186493.1:51889572-51889591
CCTAGGGGAAGGGATGAGGGTGAAAGAGGG51889572AAGAGGGGAAAATGGGAAGATACAAGTGAGGGGATAACAACTGAGATGTA
Neogale vison genome assembly, chromosome: 5.
OZ067087.1:122235326-122235345
CTCTAACTTGGGGGATGATGAAGGGAAAGG122235326AAGAGGGGAAAATGGGAAGAGTTGAGAGAAGGTTCTATCCAGAAGGAGCC
Neogale vison genome assembly, chromosome: 5.
OZ067343.1:120180594-120180613
CTCTAACTTGGGGGATGATGAAGGGAAAGG120180594AAGAGGGGAAAATGGGAAGAGTTGAGAGAAGGTTCTATCCAGAAGGAGCC
CLPY3908.b1_G17.ab1 CLP(XYZ) lettuce perennis Lactuca perennis cDNA clone CLPY3908, mRNA sequence.
DW092610.1:389-408
GAGTTTGTTGAATGAGAAAAAAGGGAGGAA389AAGAGGGGAAAATGGGAAGACTACCATGTTGCGATAAAGGCGAAGTGAAA
CLPY8047.b1_N20.ab1 CLP(XYZ) lettuce perennis Lactuca perennis cDNA clone CLPY8047, mRNA sequence.
DW097029.1:239-258
GAGTTTGTTGAATGAGAAAAAAGGGAGGAA239AAGAGGGGAAAATGGGAAGACTACCATGTTGCGATAAAGGCGAAGTGAAA
CLSY8942.b1_L03.ab1 CLS(XYZ) lettuce sativa Lactuca sativa cDNA clone CLSY8942, mRNA sequence.
DW140899.1:382-401
GAATTTGTTGAATGAGAAAAAAGGGAGGAA382AAGAGGGGAAAATGGGAAGACTACCATGTTGCGATAAAGGCGAGGTGAAA
CLSS10590.b1_K08.ab1 CLS(LMS) lettuce sativa Lactuca sativa cDNA clone CLSS10590, mRNA sequence.
DY976845.1:322-341
GAATTTGTTGAATGAGAAAAAAGGGAGGAA322AAGAGGGGAAAATGGGAAGACTACCATGTTGCGATAAAGGCGAGGTGAAA
TSA: Lactuca sativa Letassy_X1_22373 mRNA sequence.
JI586528.1:403-422
GAATTTGTTGAATGAGAAAAAAGGGAGGAA403AAGAGGGGAAAATGGGAAGACTACCATGTTGCGATAAAGGCGAGGTGAAA
Daucus carota subsp. sativus cultivar DH1 chromosome 7.
CP093349.1:369538-369557
GAATATATATGGTTACGAATGTGTATGTAA369538AAGAGGGGAAAATGGGAAGATGGAGTCATGGAGATGGGGAGGGGGGGGGG
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 2.
CP125974.1:356546661-356546680
GGCGATGGCGGAGGTGTGCACGGAAGAAAG356546661AAGAGGGGAAAATGGGAAGAATGTCTAGAACGTAGCAAAGGGCAGCGAAG
Lactuca sativa isolate DNAHIFI_1 chromosome 8.
CP154648.1:10696258-10696277
GAATTTGTTGAATGAGAAAAAAGGGAGGAA10696258AAGAGGGGAAAATGGGAAGACTACCATGTTGCGATAAAGGCGAGGTGAAA
Impatiens glandulifera genome assembly, chromosome: 1.
OU015481.1:52255665-52255684
GGAGGTGGGATAGCAAGCGACGGGGAAGGG52255665AAGAGGGGAAAATGGGAAGAAATGGAAATGGAAGGAAAAGGAAGAGAAAG
Hedera helix genome assembly, chromosome: 13.
OX359276.1:5809720-5809739
TTTATTACCCCTCAAAGAAATGAAGAAAAC5809720AAGAGGGGAAAATGGGAAGAGACAGAAAACAATTAAGAGGCAAAAACACC
Lactuca saligna genome assembly, chromosome: 8.
OX465084.1:6815417-6815436
GAATTTGTTGAATGAAAAAAAAGGGGGGAA6815417AAGAGGGGAAAATGGGAAGACTACCATGTTGCGATAAAGGCGAGGTGAAA
Hydrocotyle vulgaris genome assembly, chromosome: 41.
OZ066800.1:12896977-12896996
TGCCAAATCACCAGTAGAGAACATTAAAGC12896977AAGAGGGGAAAATGGGAAGATAAATCTTGTGAAAGAAGAGAATATTTTCT
Omalotheca supina genome assembly, chromosome: 4.
OZ182150.1:80570842-80570861
ATTGTTGAATGAGAAAGATAAAAGGAAAAA80570842AAGAGGGGAAAATGGGAAGAGCACCATGTTGTAATAAAAGTGAAGTGAAA
Rhinanthus minor genome assembly, chromosome: 6.
OZ185421.1:52518611-52518630
GAGAAACCGAGTTGAAGAGGGTTTGAGGAG52518611AAGAGGGGAAAATGGGAAGAACTACCCTCACCCATGACCTGTTATCACAT
Impatiens parviflora genome assembly, chromosome: 3.
OZ218206.1:36779488-36779507
GGTTTCGGCTGGAACGGAATCGCCGCAGGA36779488AAGAGGGGAAAATGGGAAGAGGGGAAAACGGGGAAGAAAAGAGGGTTTGC
Mesocentrotus franciscanus isolate Mf1 chromosome 17.
CP137682.1:10493202-10493221
TCACAGGTACTTAATTCCACACTTGAAACA10493202AAGAGGGGAAAATGGGAAGAGAGAAAGAGTAGAAGGTTCTCCTTTAATAC
Dolomedes plantarius genome assembly, chromosome: 6.
OU015495.1:135203593-135203612
AACAAAGGACAGCATGGCGTTGTCAAACTT135203593AAGAGGGGAAAATGGGAAGATCAAAAACTGCGTAATTCCGAGTTCGCGTA
Ceraclea dissimilis genome assembly, chromosome: 4.
OY756361.1:13784812-13784831
ACATAAAAACAGTGCACATGTCAGGACAGG13784812AAGAGGGGAAAATGGGAAGAATGAGGAATGACAGTTTTAGGTGGTTAGGT
Eumandya parva genome assembly, chromosome: 2.
OZ060464.1:77116905-77116924
GACAAAACAGAAAACGTAGAGATGAAGGAG77116905AAGAGGGGAAAATGGGAAGAAAACAACTACACGGACGGTTCATTAGGATG
Sepia officinalis genome assembly, chromosome: 2.
OZ199142.1:103012856-103012875
ATAAAAAAAATTAGGAAAGAAAAAGAGAGA103012856AAGAGGGGAAAATGGGAAGAGTCAGGGGAGAGAGAGGGAGAGAGAGAGTG
Gallus gallus BAC clone CH261-129F7 from chromosome z, complete sequence.
AC186354.3:68759-68778
ACAATTCACTAAATTGAATCGGTCATTTCA68759AAGAGGGGAAAATGGGAAGAGTGCCTCAAATCCCAAAGATAACAATGTCT
Gallus gallus BAC clone CH261-135B11 from chromosome z, complete sequence.
AC192387.4:176965-176984
ACAATTCACTAAATTGAATCGGTCATTTCA176965AAGAGGGGAAAATGGGAAGAGTGCCTCAAATCCCAAAGATAACAATGTCT
Geotrypetes seraphini genome assembly, chromosome: 1.
LR699146.1:503045536-503045555
AGACAAATCATACACAAACTTTAGATGAAC503045536AAGAGGGGAAAATGGGAAGAACTACAATAATCGGAGGAAAGTGAACATAA
Anas platyrhynchos genome assembly, chromosome: 1.
LS423611.1:21131462-21131481
GCCTGCTCTGGGGATCTGGGGTCTGGTGGG21131462AAGAGGGGAAAATGGGAAGAAAACCAGCAGAGGAAGCTCTCGCAGGGTGC
Microchirus variegatus genome assembly, chromosome: 9.
OY735182.1:9240842-9240861
AACAAGGTGGGGGGGATATGAATAGGAAGA9240842AAGAGGGGAAAATGGGAAGACAAGTGAACACACTGAATAAAAATTTCATA
Numenius arquata genome assembly, chromosome: 24.
OZ067266.1:3064103-3064122
TAAACTTTTGTGGATAATGTTAAAAACAAA3064103AAGAGGGGAAAATGGGAAGAAAGGGGGAGGGGAAGAAGTTCTTGCTTTAC
Anas platyrhynchos genome assembly, chromosome: 1.
OZ076975.1:21886618-21886637
GCCTGCTCTGGGGATCTGGGGTCTGGTGGG21886618AAGAGGGGAAAATGGGAAGAAAACCAGCAGAGGAAGCTCTCGCAGGGTGC
Lymnocryptes minimus genome assembly, chromosome: 35.
OZ199722.1:2999488-2999507
TTTTGTGGATACTGTTAAAAAAAAAAAAAA2999488AAGAGGGGAAAATGGGAAGAAAGAGGGAGGGGAGGAAGTTCTTGCTTTAC
Acomys russatus genome assembly, chromosome: 25.
LR877236.1:33802130-33802149
GTACAGCTTGTATCCGACCCCTTGTCAATC33802130TCTTCCCATTTTCCCCTCTTGCTTCTCTGCTGCCATGAGGTAAGCAGCTC
Heterocephalus glaber genome assembly, chromosome: 12.
OX090952.1:68911097-68911116
TAAATCTACTCCTGATGCTGTAAGTTGAAT68911097TCTTCCCATTTTCCCCTCTTTCCTGTTCCTTTATTTACCCTTTCCTCTTC
Peromyscus eremicus genome assembly, chromosome: 13.
OX460407.1:45539046-45539065
AATCCTGACTACAGTTTCCCCTCCCTCCAC45539046TCTTCCCATTTTCCCCTCTTACTTCCCCTCTCCCCCAGATCCATTCCTCT
Peromyscus eremicus genome assembly, chromosome: 13.
OX460479.1:45084710-45084729
AATCCTGACTACAGTTTCCCCTCCCTCTAC45084710TCTTCCCATTTTCCCCTCTTACTTCCCCTCTTCCCCAGATCCATTCCTCT
Ovis aries breed hu sheep isolate hu3095 chromosome 24.
CP162263.1:44938004-44938023
GCATCGCTCTTTCTCTCCCCTCTCTCTGTC44938004TCTTCCCATTTTCCCCTCTTCGTTTCTGTTTCTCCATCCCTCCCTCTCTT
Ovis aries breed Hu sheep isolate HU3095-Father chromosome 24.
CP162296.1:49163580-49163599
GCATCGCTCTTTCTCTCCCCTCTCTCTGTC49163580TCTTCCCATTTTCCCCTCTTCGTTTCTGTTTCTCCATCCCTCCCTCTCTT
Ovis aries breed Hu sheep isolate HU3095-Mother chromosome 24.
CP162360.1:49132556-49132575
GCATCGCTCTTTCTCTCCCCTCTCTCTGTC49132556TCTTCCCATTTTCCCCTCTTCGTTTCTGTTTCTCCATCCCTCCCTCTCTT
Sarcophilus harrisii genome assembly, chromosome: 2.
LR735555.1:439988246-439988265
ATCCTGTTTCTAAATGTTCACTGTTTCTTT439988246TCTTCCCATTTTCCCCTCTTCATTTGCACAATGTATTATCATTCATACCA
Rhinolophus hipposideros genome assembly, chromosome: 3.
OZ077420.1:45040636-45040655
TGGAAAATCAAGGTTTGTCCAAGGAATGAA45040636TCTTCCCATTTTCCCCTCTTTCTTTTCATAGATTAGTGCTGTGGAATGGA
Mustela lutreola genome assembly, chromosome: 2.
OZ182602.1:102284493-102284512
GGTTCCTTCTGGATAGAACCTTCTCTCAAC102284493TCTTCCCATTTTCCCCTCTTCCTTTCCCTTCATCATCCCCCAAGTTAGAG
Mustela nivalis genome assembly, chromosome: 1.
OZ211668.1:99570358-99570377
GGTTCCTTTTGGATAGAACCTTCTCTCAAC99570358TCTTCCCATTTTCCCCTCTTCCTTTCCCTTCATCATCCCCCAAGTTAGAG
603958609F1 CSEQRBN09 Gallus gallus cDNA clone ChEST930a4 5', mRNA sequence.
BU419839.1:681-700
AGACATTGTTATCTTTGGGATTTGAGGCAC681TCTTCCCATTTTCCCCTCTTTGAAATGACC
603234847F1 CSEQRBN09 Gallus gallus cDNA clone ChEST236m11 5', mRNA sequence.
BU427946.1:96-115
AGACATTGTTATCTTTGGGATTTGAGGCAC96TCTTCCCATTTTCCCCTCTTTGAAATGACCGATTCAATTTAGTGAATGTC
TSA: Lactuca serriola Serrassy_T_P2_6321 mRNA sequence.
JO034278.1:947-966
TTTCACCTCGCCTTTATCGCAACATGGTAG947TCTTCCCATTTTCCCCTCTTTTCCTCCCTTTTTTCTCATTCAACAAATTC
TSA: Trachemys scripta elegans comp90702_c0_seq1 mRNA sequence.
JW477828.1:405-424
GGAAGGCAGAGAAAATCTCAGAGGCACAAT405TCTTCCCATTTTCCCCTCTTGCTTGGGGCATAGAGGGAAGAAGTAGAATC
Avena longiglumis genome assembly, chromosome: 1A.
OU342747.1:280637589-280637608
CTTCGCTGCCCTTTGCTACGTTCTAGACAT280637589TCTTCCCATTTTCCCCTCTTCCTTCTTCCGTGCACACCGCCGCCATCGCC
Avena sativa genome assembly, chromosome: 15.
OV702293.1:179313730-179313749
CTTCGCTGTCCTTTGCTGCGTTCTGGACAT179313730TCTTCCCATTTTCCCCTCTTCCTTCTTCCGCGCACGCCGCGCTGTCGCTG
Pseudognaphalium luteoalbum genome assembly, chromosome: 4.
OY730195.1:1175123-1175142
TTTAACTTCACTTTTATTGCAACATGGTGC1175123TCTTCCCATTTTCCCCTCTTTCCTTAATCTTTTACCTTTTATCTTTCTCA
Gnaphalium uliginosum genome assembly, chromosome: 3.
OZ005682.1:963481-963500
TTTCACTTCACTTTTATTACAACATGGTGC963481TCTTCCCATTTTCCCCTCTTTTCTTCTTCTTTTGCCTTTTATCTTTCTCA
Herbertus hutchinsiae genome assembly, chromosome: 3.
OZ218196.1:141901308-141901327
TGCGTTTTTTTCACCGCCTTCGTTTGTTGT141901308TCTTCCCATTTTCCCCTCTTCAAAATCGCGATGACTGTCTCGCTTCCTCC
Mesocentrotus franciscanus isolate Mf1 chromosome 1.
CP137666.1:56413884-56413903
GTTTTTAATGCTTCTGTCGCTTTTTTTTCT56413884TCTTCCCATTTTCCCCTCTTTGATTGTTGTATTCTTCTCCCACACAAATT
Lasioglossum lativentre genome assembly, chromosome: 9.
OU744363.1:3560119-3560138
TCTCTCACTCTCTCTCTTCTCCTCTTACCC3560119TCTTCCCATTTTCCCCTCTTACCCCTCTTCCTCTCTTACCCCTCTTCCCC
Catocala fraxini genome assembly, chromosome: 10.
OV884034.1:6954335-6954354
TAGTACCTGAGTCACGTAATAACCTTACTT6954335TCTTCCCATTTTCCCCTCTTGTTTATTTCTACAGCCTCATTTCTTAGCGT
Thysanoteuthis rhombus genome assembly, chromosome: 26.
OY735223.1:39179072-39179091
CTTTTGGCTGACAAACCACACCTGTCTTTC39179072TCTTCCCATTTTCCCCTCTTTTTGTCCTCCCCTGGTTTCTCCATCATTTT
Sepiola atlantica genome assembly, chromosome: 9.
OY744523.1:24134399-24134418
TCGCTCTCGTTCGCCCTCTCTCTCTCTCTC24134399TCTTCCCATTTTCCCCTCTTATTACCTCTCTCTTCAATTACGTCATGACG
Salticus scenicus genome assembly, chromosome: 10.
OZ005657.1:210089216-210089235
CGTTTAAGATAATGCGTTAATATGGATTTC210089216TCTTCCCATTTTCCCCTCTTTTTTTTAATAAATTTGTCTTCAAAGTATAT
Gallus gallus breed Huxu chromosome Z.
CP100594.1:67760880-67760899
AGACATTGTTATCTTTGGGATTTGAGGCAC67760880TCTTCCCATTTTCCCCTCTTTGAAATGACCGATTCAATTTAGTGAATTGT
Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:510578416-510578435
TTTCTCCTCCCTTCTTTTTCCTAGCCTGAC510578416TCTTCCCATTTTCCCCTCTTACCCACTCCTTGGCCTGCTTCCTTTTTCTC
Geotrypetes seraphini genome assembly, chromosome: 1.
LR699146.1:130801400-130801419
TTCTGTTCACTTTCCTTTGATTATTGTAGT130801400TCTTCCCATTTTCCCCTCTTGTTCCTGTTTGTCTACAGTTTGTGTATTAT
Coregonus sp. 'balchen' genome assembly, chromosome: 10.
LR778262.1:8573583-8573602
GAGTCTGTCTTCCTCTTCTCTCTCTCGCTT8573583TCTTCCCATTTTCCCCTCTTTCTATTTAATTCTGTATGTCTCTCTCTACC
Blennius ocellaris genome assembly, chromosome: 11.
OY730211.1:21295065-21295084
TACTTTCTTCTGCTTCTAGCATTTGTTTCT21295065TCTTCCCATTTTCCCCTCTTTTCAGCCTCTCTCATCCGTTGCAGTGACAA
Anas acuta genome assembly, chromosome: 1.
OZ009962.1:183348017-183348036
GCACCCTGCGAGAGCTTCCTCTGCTGGTTT183348017TCTTCCCATTTTCCCCTCTTCCCACCAGACCCCAGCTCCCCAGAGCAGGC
Podarcis siculus genome assembly, chromosome: 1.
OZ076838.1:76974113-76974132
TAAAAGTCATTTCACTACCCTATGACCACT76974113TCTTCCCATTTTCCCCTCTTTCTCCCTTTCCACCCACATTAACCAGCATA
Coregonus lavaretus genome assembly, chromosome: 12.
OZ182175.1:7449894-7449913
AGTCTTGTCTTCCTCTTCTCTCTCTCGCTT7449894TCTTCCCATTTTCCCCTCTTTCTATTTAATTCTGTATGTCTCTCTCTACC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAGAGGGGAAAATGGGAAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGAGGGGAAAATGGGAAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.605 | 0.596 | search_plus_done; http://172.18.8.135:50800/match?q=AAGAGGGGAAAATGGGAAGA&k=0&no_gap=0&offset=0&limit=50
0.967 | 0.362 | search_minus_done; http://172.18.8.135:50800/match?q=TCTTCCCATTTTCCCCTCTT&k=0&no_gap=0&offset=0&limit=12
0.990 | 0.023 | cgi_end;

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