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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:59:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

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RCRST0_006404 Foxtail millet forward subtracted cDNA library in response to dehydration stress Setaria italica cDNA clone RCRST0_006404 5', mRNA sequence.
EC612780.1:350-369
GACAGTTTTGTTTGGTCGTTTCGTCAGAGC350AAGATTTTGGCACGCTGACTACCAGTATTACAAAAGGAGTTCATGTCACA
CBYZ9209.b1 CBYZ Panicum virgatum Kanlow 4 day old seedlings Panicum virgatum cDNA clone CBYZ9209 5', mRNA sequence.
FE651452.1:671-690
TACAGTTTTGTTTGGTCGTTCCGTCGGAGC671AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAGTTCCTTCAG
CCGB3832.b1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB3832 5', mRNA sequence.
FL717384.1:290-309
TACAGTTTTGTTTGGTCGTTCCGTCGGAGC290AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAGTTCCTTCAGTT
CCGI1704.b1 CCGI Panicum virgatum etiolated seedlings (H) Panicum virgatum cDNA clone CCGI1704 5', mRNA sequence.
FL851587.1:421-440
TACAGTTTTGTTTGGTCGTTTCGTCAAAGC421AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAGTTCCTTCAGTT
CCHY29615.b1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY29615 5', mRNA sequence.
GD005773.1:502-521
TACAGTTTTGTTTGGTCGTTCCGTCGGTGC502AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAGTTCCTTCAGTT
CCHZ3315.b1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum cDNA clone CCHZ3315 5', mRNA sequence.
GD009892.1:81-100
TACAGTTTTGTTTGGTCGTTTCGTTGAAGC81AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAGTTCCTTCAGTT
CCHZ19774.b1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum cDNA clone CCHZ19774 5', mRNA sequence.
GD038105.1:501-520
TACAGTTTTGTTTGGTCGTTTCGTTGAAGC501AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAGTTCCTTCAGTT
CCHZ28930.b1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum cDNA clone CCHZ28930 5', mRNA sequence.
GD048642.1:501-520
TACAGTTTTGTTTGGTCGTTTCGTCGAAGC501AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAGTTCCTTCAGTT
CCTW2255.b1 CCTW Panicum virgatum Carthage normalized leaf Panicum virgatum cDNA clone CCTW2255 5', mRNA sequence.
HO246214.1:62-81
TACAGTTTTGTTTGGTCGTTCCGTCGGAGC62AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAGTTCCTTCAGTT
CCTY904.b1 CCTY Panicum virgatum Kanlow normalized leaf Panicum virgatum cDNA clone CCTY904 5', mRNA sequence.
HO270200.1:500-519
TACAGTTTTGTTTGGTCGTTCCGTCGGAGC500AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAGTTCCTTCAGTT
CFBY2755.b1 CFBY Panicum virgatum Dacotah normalized leaf Panicum virgatum cDNA clone CFBY2755 5', mRNA sequence.
HO282560.1:482-501
TACAGTTTTGTTTGGTCGTTTCGTTGAAGC482AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAGTTCCTTCAGTT
CFBY863.b1 CFBY Panicum virgatum Dacotah normalized leaf Panicum virgatum cDNA clone CFBY863 5', mRNA sequence.
HO289341.1:555-574
TACAGTTTTGTTTGGTCGTTTCGTTGAAGC555AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAGTTCCTTCAGTT
CFHB4012.b1 CFHB Panicum virgatum U418 normalized leaf Panicum virgatum cDNA clone CFHB4012 5', mRNA sequence.
HO324286.1:268-287
TACAGTTTTGTTTGGTCGTTTCGTTGAAGC268AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAGTTCCTTCAGTT
CFNU5441.b1 CFNU Panicum virgatum AP13 normalized full shoot Panicum virgatum cDNA clone CFNU5441 5', mRNA sequence.
JG808350.1:526-545
TACAGTTTTGTTTGGTCGTTCCGTCGGAGC526AAGATTTTGGCACGCTGACTACCAGTATTACCAACGGAGTTCCTTCAGTT
CFNU11804.b1 CFNU Panicum virgatum AP13 normalized full shoot Panicum virgatum cDNA clone CFNU11804 5', mRNA sequence.
JG819974.1:304-323
TACAGTTTTGTTTGGTCGTTCCGTCGGAGC304AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAGTTCCTTCAGTT
CFNU17152.b1 CFNU Panicum virgatum AP13 normalized full shoot Panicum virgatum cDNA clone CFNU17152 5', mRNA sequence.
JG829560.1:759-778
TACAGTTTTGTTTGGTCGTTCCGTCGGAGC759AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAG
UNQ09-C12.x1d-t UNQ (Panicum virgatum cv. Alamo-AP13) Panicum virgatum cDNA 5', mRNA sequence.
JG881461.1:419-438
TACAGTTTTGTTTGGTCGTTCCGTCGGAGC419AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAGTTCCTTCAGTT
CFBX11662.b1 CFBX Setaria italica Yugu1 whole seedlings Setaria italica cDNA clone CFBX11662 5', mRNA sequence.
JK565414.1:350-369
TACAGTTTTGTTTGGTCGTTTCGTTGAAGC350AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAGTTCCTTCAGTT
CFGZ3587.b1 CFGZ Setaria italica Yugu1 floral spike Setaria italica cDNA clone CFGZ3587 5', mRNA sequence.
JK585351.1:494-513
TACAGTTTTGTTTGGTCGTTTCGTCAGAGC494AAGATTTTGGCACGCTGACTACCAGTATTACAAAAGGAGTTCATGTCACA
CFGZ4485.b1 CFGZ Setaria italica Yugu1 floral spike Setaria italica cDNA clone CFGZ4485 5', mRNA sequence.
JK587087.1:152-171
TACAGTTTTGTTTGGTCGTTTCGTCAGAGC152AAGATTTTGGCACGCTGACTACCAGTATTACAAAAGGAGTTCATGTCACA
Cenchrus purpureus cultivar elephant grass chromosome A2.
CP053455.1:13335997-13336016
TACAGTTTTGTTTGGTCGTTTCGTCAGAGC13335997AAGATTTTGGCACGCTGACTACAAAAGGAGTTCTAGTTCATGTGGCACGG
Cenchrus purpureus cultivar elephant grass chromosome B2.
CP053462.1:119084488-119084507
CGGTATAGTTTTGTTTGGTGTTGTCAGAGC119084488AAGATTTTGGCACGCTGACTACCAGTATTACCAAAGGAGGAGCTCCTTCA
Paspalum notatum var. saurae isolate R1 chromosome 02.
CP144746.1:55472367-55472386
TACAGTTTTGTGTGGCCGTTTCGTCGGAGC55472367AAGATTTTGGCACGCTGACTACCGGTTATCAAAGGAGGAGGCTCAGTTTA
Phragmites australis genome assembly, chromosome: 3.
OY282614.1:49023383-49023402
TACAATTTTGTGGGGTCACTTCGTCGCGCG49023383AAGATTTTGGCACGCTGACTACCAAAGGAGCTCCTCCAGTTTATTCATGT
Accipiter gentilis genome assembly, chromosome: 2.
OV839362.1:26981235-26981254
GCTCTCTGGTAAGCAACATCATCTTGTCCT26981235AGTCAGCGTGCCAAAATCTTGAATGCTTGGTCAGAAGAAAGAAAGAGTAA
CBYZ5245.g1 CBYZ Panicum virgatum Kanlow 4 day old seedlings Panicum virgatum cDNA clone CBYZ5245 3', mRNA sequence.
FE644427.1:269-288
AACTGAAGGAACTCCTTTGGTAATACTGGT269AGTCAGCGTGCCAAAATCTTGCTCCGACGGAACGACCAAACAAAACTGTA
CBYZ9209.g1 CBYZ Panicum virgatum Kanlow 4 day old seedlings Panicum virgatum cDNA clone CBYZ9209 3', mRNA sequence.
FE651453.1:269-288
AACTGAAGGAACTCCTTTGGTAATACTGGT269AGTCAGCGTGCCAAAATCTTGCTCCGACGGAACGACCAAACAAAACTGTA
CBYZ11741.g1 CBYZ Panicum virgatum Kanlow 4 day old seedlings Panicum virgatum cDNA clone CBYZ11741 3', mRNA sequence.
FE655064.1:269-288
AACTGAAGGAACTCCTTTGGTAATACTGGT269AGTCAGCGTGCCAAAATCTTGCTCCGACGGAACGACCAAACAAAACTGTA
CCGB3832.g1 CCGB Panicum virgatum apex + stem (L) Panicum virgatum cDNA clone CCGB3832 3', mRNA sequence.
FL717385.1:237-256
AACTGAAGGAACTCCTTTGGTAATACTGGT237AGTCAGCGTGCCAAAATCTTGCTCCGACGGAACGACCAAACAAAACTGTA
CCGG19092.g1 CCGG Panicum virgatum late flowering buds + seed development (H) Panicum virgatum cDNA clone CCGG19092 3', mRNA sequence.
FL823668.1:269-288
AACTGAAGGAACTCCTTTGGTAATACTGGT269AGTCAGCGTGCCAAAATCTTGCTTCGACGAAACGACCAAACAAAACTGTA
CCGI1704.g1 CCGI Panicum virgatum etiolated seedlings (H) Panicum virgatum cDNA clone CCGI1704 3', mRNA sequence.
FL851588.1:111-130
AACTGAAGGAACTCCTTTGGTAATACTGGT111AGTCAGCGTGCCAAAATCTTGCTTTGACGAAACGACCAAACAAAACTGTA
CCGI2050.g1 CCGI Panicum virgatum etiolated seedlings (H) Panicum virgatum cDNA clone CCGI2050 3', mRNA sequence.
FL852217.1:268-287
AACTGAAGGAACTCCTTTGGTAATACTGGT268AGTCAGCGTGCCAAAATCTTGCTCCGACGGAACGACCAAACAAAACTGTA
CCHY4772.g1 CCHY Panicum virgatum callus (N) Panicum virgatum cDNA clone CCHY4772 3', mRNA sequence.
FL960788.1:237-256
AACTGAAGGAACTCCTTTGGTAATACTGGT237AGTCAGCGTGCCAAAATCTTGCTCCGACGGAACGACCAAACAAAACTGTA
CCHZ3315.g1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum cDNA clone CCHZ3315 3', mRNA sequence.
GD009893.1:269-288
AACTGAAGGAACTCCTTTGGTAATACTGGT269AGTCAGCGTGCCAAAATCTTGCTTCAACGAAACGACCAAACAAAACTGTA
CCHZ4444.g1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum cDNA clone CCHZ4444 3', mRNA sequence.
GD011705.1:268-287
AACTGAAGGAACTCCTTTGGTAATACTGGT268AGTCAGCGTGCCAAAATCTTGCTTCAACGAAACGACCAAACAAAACTGTA
CCHZ19774.g1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum cDNA clone CCHZ19774 3', mRNA sequence.
GD038106.1:269-288
AACTGAAGGAACTCCTTTGGTAATACTGGT269AGTCAGCGTGCCAAAATCTTGCTTCAACGAAACGACCAAACAAAACTGTA
CCHZ28930.g1 CCHZ Panicum virgatum abiotic and biotic stress treatments (N) Panicum virgatum cDNA clone CCHZ28930 3', mRNA sequence.
GD048643.1:288-307
AACTGAAGGAACTCCTTTGGTAATACTGGT288AGTCAGCGTGCCAAAATCTTGCTTCGACGAAACGACCAAACAAAACTGTA
CFBY2755.g1 CFBY Panicum virgatum Dacotah normalized leaf Panicum virgatum cDNA clone CFBY2755 3', mRNA sequence.
HO282561.1:269-288
AACTGAAGGAACTCCTTTGGTAATACTGGT269AGTCAGCGTGCCAAAATCTTGCTTCAACGAAACGACCAAACAAAACTGTA
CFBY863.g1 CFBY Panicum virgatum Dacotah normalized leaf Panicum virgatum cDNA clone CFBY863 3', mRNA sequence.
HO289342.1:269-288
AACTGAAGGAACTCCTTTGGTAATACTGGT269AGTCAGCGTGCCAAAATCTTGCTTCAACGAAACGACCAAACAAAACTGTA
CFNU5441.g1 CFNU Panicum virgatum AP13 normalized full shoot Panicum virgatum cDNA clone CFNU5441 3', mRNA sequence.
JG808351.1:268-287
AACTGAAGGAACTCCGTTGGTAATACTGGT268AGTCAGCGTGCCAAAATCTTGCTCCGACGGAACGACCAAACAAAACTGTA
CFNU11804.g1 CFNU Panicum virgatum AP13 normalized full shoot Panicum virgatum cDNA clone CFNU11804 3', mRNA sequence.
JG819975.1:268-287
AACTGAAGGAACTCCTTTGGTAATACTGGT268AGTCAGCGTGCCAAAATCTTGCTCCGACGGAACGACCAAACAAAACTGTA
CFNU17152.g1 CFNU Panicum virgatum AP13 normalized full shoot Panicum virgatum cDNA clone CFNU17152 3', mRNA sequence.
JG829561.1:221-240
AACTGAAGGAACTCCTTTGGTAATACTGGT221AGTCAGCGTGCCAAAATCTTGCTCCGACGGAACGACCAAACAAAACTGTA
UNQ09-C12.y1d-s UNQ (Panicum virgatum cv. Alamo-AP13) Panicum virgatum cDNA 3', mRNA sequence.
JG953334.1:373-392
AACTGAAGGAACTCCTTTGGTAATACTGGT373AGTCAGCGTGCCAAAATCTTGCTCCGACGGAACGACCAAACAAAACTGTA
CFBX11662.g1 CFBX Setaria italica Yugu1 whole seedlings Setaria italica cDNA clone CFBX11662 3', mRNA sequence.
JK565415.1:269-288
AACTGAAGGAACTCCTTTGGTAATACTGGT269AGTCAGCGTGCCAAAATCTTGCTTCAACGAAACGACCAAACAAAACTGTA
CFBX18218.g1 CFBX Setaria italica Yugu1 whole seedlings Setaria italica cDNA clone CFBX18218 3', mRNA sequence.
JK576853.1:269-288
AACTGAAGGAACTCCTTTGGTAATACTGGT269AGTCAGCGTGCCAAAATCTTGCTCCGACGGAACGACCAAACAAAACTGTA
CFGZ3587.g1 CFGZ Setaria italica Yugu1 floral spike Setaria italica cDNA clone CFGZ3587 3', mRNA sequence.
JK585352.1:283-302
TGTGACATGAACTCCTTTTGTAATACTGGT283AGTCAGCGTGCCAAAATCTTGCTCTGACGAAACGACCAAACAAAACTGTA
TSA: Panicum hallii var. filipes contig14811.PhfFIL2 mRNA sequence.
JR063815.1:279-298
ACTGAAGGAACTCCTTTGGTAATAACTGGT279AGTCAGCGTGCCAAAATCTTGCTCCGACGAAACGACCAAACAAAACTGTA
HDE286C03.F HDE Setaria viridis genomic 5', genomic survey sequence.
KS213863.1:7-26
CACGGT7AGTCAGCGTGCCAAAATCTTGCTCTGACGAAACGACCAAACAAAACTGTA
Setaria viridis cultivar ME034v chromosome 9.
CP050803.1:1449076-1449095
ATGAACTGGAACTCCTTTTGTAATACTGGT1449076AGTCAGCGTGCCAAAATCTTGCTCTGACGAAACGACCAAACAAAACTGTA
Phragmites australis genome assembly, chromosome: 4.
OY282615.1:1772353-1772372
TACATGAATAAACTGAAGCAGCTCCTTGGT1772353AGTCAGCGTGCCAAAATCTTCGCGACGAAGTCACCACACAAAACTGTAGG
Cenchrus americanus genome assembly, chromosome: Pg2.
OZ001406.1:3172495-3172514
TGAACTGGAACTCCTTTGTGTAATACTGGT3172495AGTCAGCGTGCCAAAATCTTGCTCTGACGAAACAACCAAACAAAACTGTA
Lathyrus aphaca genome assembly, chromosome: 1.
OZ014519.1:732582800-732582819
AAACCTGCGAAATTCCAAGGAAGGAAATGA732582800AGTCAGCGTGCCAAAATCTTTATTCAAATATTTGATATAATATTTTATGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAGATTTTGGCACGCTGACT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGATTTTGGCACGCTGACT | format : html | download : | debug :

0.009 | 0.009 | search_start;
1.740 | 1.731 | search_plus_done; http://172.18.8.135:50400/match?q=AAGATTTTGGCACGCTGACT&k=0&no_gap=0&offset=0&limit=50
3.485 | 1.746 | search_minus_done; http://172.18.8.135:50400/match?q=AGTCAGCGTGCCAAAATCTT&k=0&no_gap=0&offset=0&limit=26
3.504 | 0.018 | cgi_end;

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