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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-08 07:45:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Sequence 1 from Patent WO2005068637.
CS135304.1:1-20
1AAGCACACCACCACCCGTAA
KR 1020067016089-A/1: Novel Melon Plants.
DI108332.1:1-20
1AAGCACACCACCACCCGTAA
JP 2007520216-A/1: Novel Melon Plants.
DJ089121.1:1-20
1AAGCACACCACCACCCGTAA
Sequence 1 from patent US 8829265.
HK132332.1:1-20
1AAGCACACCACCACCCGTAA
Cucumis melo genomic scaffold, anchoredscaffold00076.
LN681883.1:99080-99099
CTTACATCTAAGCTTAGCTTTCTTTTTTTG99080AAGCACACCACCACCCGTAACCAGAGACTAATTTAACCCATGACAATATT
Azorinus chamasolen genome assembly, chromosome: 8.
OY755242.1:15632536-15632555
TAGGCAATGGCCAGGTGATCCAACGCCAAG15632536AAGCACACCACCACCCGTAACTTCACGTCCCTCATTGGAATATCCCACCA
Cucumis melo isolate PI 511890 chromosome 8.
CP136107.1:27160505-27160524
AATATTGTCATGGGTTAAATTAGTCTCTGG27160505TTACGGGTGGTGGTGTGCTTCAAAAAAAGAAAGCTAAGCTTAGATGTAAG
Cucumis melo genomic chromosome, chr_8.
LN713262.1:26427464-26427483
AATATTGTCATGGGTTAAATTAGTCTCTGG26427464TTACGGGTGGTGGTGTGCTTCAAAAAAAGAAAGCTAAGCTTAGATGTAAG
Bombylius major genome assembly, chromosome: 2.
OW052043.1:17485694-17485713
AAACAACAAAAAATGTAGCGGTATTCAAAC17485694TTACGGGTGGTGGTGTGCTTTTTTCTAATTTTCTATTTTCTTTTATTCCT
Bombylius discolor genome assembly, chromosome: 3.
OW584240.1:12761592-12761611
ATCAAAAACAAAAATGTAGCGGTATTCAAC12761592TTACGGGTGGTGGTGTGCTTTTTTCTAATTTTCTATTTTCTTTTATTCCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAGCACACCACCACCCGTAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGCACACCACCACCCGTAA | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.405 | 0.397 | search_plus_done; http://172.18.8.135:50400/match?q=AAGCACACCACCACCCGTAA&k=0&no_gap=0&offset=0&limit=50
0.509 | 0.103 | search_minus_done; http://172.18.8.135:50400/match?q=TTACGGGTGGTGGTGTGCTT&k=0&no_gap=0&offset=0&limit=44
0.512 | 0.003 | cgi_end;

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