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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:23:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Vespertilio murinus genome assembly, chromosome: 5.
OZ004708.1:153225908-153225927
ACCCAGAGAGCACAGGACAGCAGAGGAGAG153225908AAGCACCAAGACAGCACAACATAAGGTGACACACTGACATCCTCCCCAGC
Rana temporaria genome assembly, chromosome: 3.
LR991682.1:61641001-61641020
TGAGGACTGAGGTTGAGAACCACTGCTGTA61641001AAGCACCAAGACAGCACAACAGTCAGCCAGCTAGAATTTTCAGAATATGC
Acipenser ruthenus genome assembly, chromosome: 6.
OV737687.1:75792138-75792157
TGCACTGAGGCTCTGAGACCCTGAATGCCG75792138AAGCACCAAGACAGCACAACACTGGGGCACCAGGGGCGCCGAAGCACCAA
Acipenser ruthenus genome assembly, chromosome: 6.
OV754675.1:75018082-75018101
TGCACTGAGGCTCTGAGACCCTGAATGCCG75018082AAGCACCAAGACAGCACAACACTGGGGCACCAGGGGCGCCGAAGCACCAA
Pipistrellus pipistrellus genome assembly, chromosome: 11.
LR862367.1:28815991-28816010
GCTGTGGAGTATGTCAGTATGTCACATTAT28815991GTTGTGCTGTCTTGGTGCTTCTCTCCTCCCCCGTCCTGTGCTCTCTGGGT
Pipistrellus nathusii genome assembly, chromosome: 10.
OY882867.1:30723597-30723616
GCTGTGGAGTATGTCAGTATGTCACATTAT30723597GTTGTGCTGTCTTGGTGCTTCTCTCCTCCCCCGTCCTGTGCTCTCTGGGT
Pipistrellus nathusii genome assembly, chromosome: 10.
OY883187.1:30774106-30774125
GCTGTGGAGTATGTCAGTATGTCACATTAT30774106GTTGTGCTGTCTTGGTGCTTCTCTCCTCCCCCATCCTGTGCTCTCTGGGT
Trididemnum clinides genome assembly, chromosome: 15.
OY776298.1:20533830-20533849
TGACTTCAAGGCATCGTTGCACACAAGCGT20533830GTTGTGCTGTCTTGGTGCTTTGTAGTCAAAATAAGGCCACATTTTGCGGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAGCACCAAGACAGCACAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGCACCAAGACAGCACAAC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.173 | 0.164 | search_plus_done; http://172.18.8.135:50400/match?q=AAGCACCAAGACAGCACAAC&k=0&no_gap=0&offset=0&limit=50
0.245 | 0.072 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGTGCTGTCTTGGTGCTT&k=0&no_gap=0&offset=0&limit=46
0.247 | 0.003 | cgi_end;

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