GGGenome | Results

2025-04-08 15:39:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

TSA: Elaeis guineensis isotig02833.Elguifruit mRNA sequence.
JO090086.1:202-225

AGAAAGTAGCTATTTGACAACCCACATCAT202AAGCCCATTAACTTGCAGAGGCACCAATAGGCTAATCATATGCCAATATAGGTG

Elaeis guineensis 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase 1-like protein mRNA, complete cds.
KC146052.1:1101-1124

CACCTATATTGGCATATGATTAGCCTATTG1101GTGCCTCTGCAAGTTAATGGGCTTATGATGTGGGTTGTCAAATAGCTACTTTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.102 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=AAGCCCATTAACTTGCAGAGGCAC&k=0&no_gap=0&offset=0&limit=50
0.122 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=GTGCCTCTGCAAGTTAATGGGCTT&k=0&no_gap=0&offset=0&limit=49
0.123 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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