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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 18:18:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EST404985 tomato breaker fruit, TIGR Solanum lycopersicum cDNA clone cLEG9K1, mRNA sequence.
BE433907.1:460-484
GACCAGTATATGATGCTAACCCGAATCCTA460AAGCCTCCTTGACAAATGCATATAGAAATAGCCTGCGTGTGGCAAAAGAGAACAA
EST435704 tomato developing/immature green fruit Solanum lycopersicum cDNA clone cLEM18D9 5' sequence, mRNA sequence.
BF050546.1:203-227
GACCAGTATATGATGCTAACCCGAATCCTA203AAGCCTCCTTGACAAATGCATATAGAAATAGCCTGCGTGTGGCAAAAGAGAACAA
Solanum lycopersicum cDNA, clone: FA34DD06, 5' end, expressed in maturing fruit.
BP886554.1:445-469
GACCAGTATATGATGCTAACCCGAATCCTA445AAGCCTCCTTGACAAATGCATATAGAAATAGCCTG
Solanum lycopersicum cDNA, clone: FC08BA01, 5' end, expressed in fruit.
BW687119.1:588-612
GACCAGTATATGATGCTAACCCGAATCCTA588AAGCCTCCTTGACAAATGCATATAGAAATAGCCTGCGTGTGGCAAAAGAGAACAA
Solanum lycopersicum cDNA, clone: LEFL3024D23, 5' end sequence in root.
FS182692.1:392-416
GACCAGTATATGATGCTAACCCGAATCCTA392AAGCCTCCTTGACAAATGCATATAGAAATAGCCTGCGTGTGGCAAAAGAGAACAA
Solanum lycopersicum cultivar Heinz 1706 chromosome 5 clone C05HBa0138J03, complete sequence.
AC196876.2:71647-71671
GACCAGTATATGATGCTAACCCGAATCCTA71647AAGCCTCCTTGACAAATGCATATAGGTTTGTGAATGATTGTTAATATTACTCGTA
Solanum lycopersicum Micro-Tom DNA, chromosome 5, draft genome sequence.
AP028939.1:65791812-65791836
GACCAGTATATGATGCTAACCCGAATCCTA65791812AAGCCTCCTTGACAAATGCATATAGGTTTGTGAATGATTGTTAATATTACTCGTA
Solanum lycopersicum cultivar I-3 chromosome 5.
CP023761.1:62527729-62527753
GACCAGTATATGATGCTAACCCGAATCCTA62527729AAGCCTCCTTGACAAATGCATATAGGTTTGTGAATGATTGTTAATATTACTCGTA
Solanum pennellii chromosome ch05, complete genome.
HG975444.1:74424762-74424786
GACCAGTATATGATGCTAACCCGAATCCTA74424762AAGCCTCCTTGACAAATGCATATAGGTTTGTGAATGATTGTTAATATTACTCGTA
Solanum lycopersicum chromosome ch05, complete genome.
HG975517.1:61675028-61675052
GACCAGTATATGATGCTAACCCGAATCCTA61675028AAGCCTCCTTGACAAATGCATATAGGTTTGTGAATGATTGTTAATATTACTCGTA
Solanum lycopersicum genome assembly, chromosome: 5.
OU640348.1:63417093-63417117
GACCAGTATATGATGCTAACCCGAATCCTA63417093AAGCCTCCTTGACAAATGCATATAGGTTTGTGAATGATTGTTAATATTACTCGTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAGCCTCCTTGACAAATGCATATAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGCCTCCTTGACAAATGCATATAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.309 | 0.301 | search_plus_done; http://172.18.8.135:50400/match?q=AAGCCTCCTTGACAAATGCATATAG&k=0&no_gap=0&offset=0&limit=50
0.402 | 0.092 | search_minus_done; http://172.18.8.135:50400/match?q=CTATATGCATTTGTCAAGGAGGCTT&k=0&no_gap=0&offset=0&limit=39
0.402 | 0.000 | cgi_end;

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