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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-11 15:24:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Thunnus albacares genome assembly, chromosome: 6.
OU607597.1:2530704-2530722
GAGAGAGAGAGTGAGAGAGAGAAAGAGTGA2530704AAGCGACGGAAATAGAGAGAATGACAGAGGATGAAGGAATGAAGAGAGA
penium_71836_c44846_c Penium margaritaceum EST library Penium margaritaceum cDNA 5', mRNA sequence.
HO610728.1:35-53
TCCGACTCAGAGACGCACTCGGTGGGGCGG35AAGCGACGGAAATAGAGAGATGCACTATCTTCGCCCACCCTCCGGGGAG
TSA: Penium margaritaceum pmar_71836_c44846_c mRNA sequence.
JO231191.1:35-53
TCCGACTCAGAGACGCACTCGGTGGGGCGG35AAGCGACGGAAATAGAGAGATGCACTATCTTCGCCCACCCTCCGGGGAG
Citrus reticulata microsatellite DNA, clone CiO1D1O.
AJ567396.1:164-182
TGTCTTGAACTTTCCAATCAATCAGTATAT164AAGCGACGGAAATAGAGAGAGAGAGAGAGAGCAATTAATAAAATGGCGA
Vitis rotundifolia cultivar Noble chromosome 18.
CP092943.1:1259521-1259539
GAATCATGCAATTCAGCCCATGAAAAATAA1259521AAGCGACGGAAATAGAGAGAATTTGTGCGATAAAATGATTCCTAGACAG
Vitis vinifera cultivar Pinot Noir 40024 chromosome 18.
CP126665.1:1463254-1463272
AATCATGCAATTCAGCCCATGAAAAAATAA1463254AAGCGACGGAAATAGAGAGAATTTGTGCGATAAAATGATTCCTGGACAG
Vitis x doaniana cultivar PI 588149 chromosome 18.
CP128326.1:1415942-1415960
GAATCATGCAATTCAGCCCATGAAAAATAA1415942AAGCGACGGAAATAGAGAGAATTTGTGCGATAAAATGATTCCTGGACAG
Vitis x doaniana cultivar PI 588149 chromosome 18.
CP128345.1:1422072-1422090
GAATCATGCAATTCAGCCCATGAAAAATAA1422072AAGCGACGGAAATAGAGAGAATTTGTGCGATAAAATGATTCCTGGACAG
Vitis vinifera cv. PN40024, annotated scaffold_1.assembly12x.
FN595227.1:358402-358420
AATCATGCAATTCAGCCCATGAAAAAATAA358402AAGCGACGGAAATAGAGAGAATTTGTGCGATAAAATGATTCCTGGACAG
Citrus reshni microsatellite DNA, locus mCrCIR01D10.
FR692357.1:164-182
TGTCTTGAACTTTCCAATCAATCAGTATAT164AAGCGACGGAAATAGAGAGAGAGAGAGAGAGCAATTAATAAAATGGCGA
Citrus sinensis genome assembly, chromosome: 2.
OY754319.1:11845856-11845874
TTGAACTTTCCTATCAATCAATATATAATT11845856AAGCGACGGAAATAGAGAGAGAGAGCAAAAAATAAACGGCGAAGAATGA
Harpalus rufipes genome assembly, chromosome: 7.
OX596281.1:12439486-12439504
ACACAAGAGCACATGTCAAGTTTTGTTTAC12439486AAGCGACGGAAATAGAGAGATGCGCAATGGGGACTTATAATTTTGACGT
Harpalus rufipes genome assembly, chromosome: 9.
OX596283.1:28454033-28454051
AAAGCACACAAACAAACAAGTTTTGTTTAC28454033AAGCGACGGAAATAGAGAGACACGCAATAGGGTGGTTGCAAGATTTTTG
Thunnus maccoyii genome assembly, chromosome: 6.
OU343196.1:33053434-33053452
TCTCTCTTCATTCCTTCATCCTCTGTCATT33053434CTCTCTATTTCCGTCGCTTTCATTCTTTCTCACTCTCTCTCTCTCTCTA
Vitis vinifera contig VV78X050883.21, whole genome shotgun sequence.
AM428484.2:36419-36437
CTGTCCAGGAATCATTTTATCGCACAAATT36419CTCTCTATTTCCGTCGCTTTTATTTTTCATGGGCTGAATTGCATGATTC
Zeuzera pyrina genome assembly, chromosome: 8.
OU015625.1:5867961-5867979
AAATTAGTTCGTTCCTACCTCTATGCTCCT5867961CTCTCTATTTCCGTCGCTTTAACCTTCTATCATAAACTTAAAAAGAATA
Harpalus rufipes genome assembly, chromosome: 2.
OX596275.1:55263483-55263501
GTTTCTTGTTCATCGCCTGCAATCGCGGGT55263483CTCTCTATTTCCGTCGCTTATAAACAACACTTGATATGCTTTTGTGTTT
Sepiola atlantica genome assembly, chromosome: 5.
OY744519.1:140672684-140672702
TGTATATTAGTTTGAGAGTAGCTTCTCACT140672684CTCTCTATTTCCGTCGCTTCCCGTCTCCCTCTGTTTCCGTCGCTTCCCG
Microdon myrmicae genome assembly, chromosome: 2.
OZ007497.1:123193726-123193744
ACCTCTTTTCTTTCGCCCTTCTTCTTTAAC123193726CTCTCTATTTCCGTCGCTTCTCCTTCACGTCTCTACCCCGACCCTCGTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAGCGACGGAAATAGAGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGCGACGGAAATAGAGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.323 | 0.314 | search_plus_done; http://172.18.8.135:50400/match?q=AAGCGACGGAAATAGAGAG&k=0&no_gap=0&offset=0&limit=50
0.434 | 0.112 | search_minus_done; http://172.18.8.135:50400/match?q=CTCTCTATTTCCGTCGCTT&k=0&no_gap=0&offset=0&limit=37
0.438 | 0.004 | cgi_end;

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