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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-06 05:25:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Musa acuminata subsp. malaccensis isolate AA chromosome 3.
CP126372.1:844422-844441
ACCTTCCATAAACGAAGGTAGATCGAAGAA844422AAGGAGGAGAGAGTCGGAGGAAGCCAAAAAGCTCACCTATGACTGATCAC
Musa acuminata subsp. malaccensis isolate AA chromosome 14.
CP126383.1:837260-837279
ACCTTCCATAAACGAAGGTAGATCGAAGAA837260AAGGAGGAGAGAGTCGGAGGAAGCCAAAAAGCTCACCTATGACTGATCAC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A03.
HG996468.1:835633-835652
ACCTTCCATAAACGAAGGTAGATCGAAGAA835633AAGGAGGAGAGAGTCGGAGGAAGCCAAAAAGCTCACCTATGACTGATCAC
Musa schizocarpa genome assembly, chromosome: S03.
LS990917.1:857704-857723
ACCTTCCATAAACGAAGGTAGATCGAAGAA857704AAGGAGGAGAGAGTCGGAGGAAGCCAGAAAGCTCACCTATGACTGATCAC
Lathyrus sativus genome assembly, chromosome: 2.
OZ012736.1:395308014-395308033
TGGGCAATTAGTGGAGAAAGTGTAGGAAAA395308014AAGGAGGAGAGAGTCGGAGGAAATTAAATTCGTGCACGCTTCTGTTTTAC
Napeogenes inachia genome assembly, chromosome: 12.
OY365803.1:14121650-14121669
AAAAAGAGAGATGGAGAGGATCGCGGAGGA14121650AAGGAGGAGAGAGTCGGAGGCCCAGCGAGGAGCTGTAGTGCAGGTGGAGC
Pipistrellus nathusii genome assembly, chromosome: 17.
OY882874.1:17153262-17153281
CGAACAGCCCGAACACCAGGCCTCCCTTCT17153262CCTCCGACTCTCTCCTCCTTCCCCGATCTGCACCTCTCACCACATCCTGG
Pipistrellus nathusii genome assembly, chromosome: 17.
OY883194.1:17237888-17237907
CGAACAGCCCGAAAGCCAGGCCTCCCTTCT17237888CCTCCGACTCTCTCCTCCTTCCCCGATCTGCACCTCTCACCACATCCTGG
Sparus aurata genome assembly, chromosome: 6.
LR537126.1:27824005-27824024
TGTAAAAAATATCGAGGAAAGCATCTGTTG27824005CCTCCGACTCTCTCCTCCTTATACCCAGACCTCCATCCATATATCTGTCC
Napeogenes sylphis genome assembly, chromosome: 12.
OY365788.1:5822380-5822399
GCTCCACCTGCACTACAGCCCCTCGCTGGG5822380CCTCCGACTCTCTCCTCCTTTCCTCCGCGATCCTCTCCATCTCTCTTTTT
Leptogaster cylindrica genome assembly, chromosome: 4.
OY720108.1:1404524-1404543
ATATGAAGATTTTCAAGAGAATTTCCTCTA1404524CCTCCGACTCTCTCCTCCTTCAAACCGACCTTGATAACTTTTACACCTGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAGGAGGAGAGAGTCGGAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGGAGGAGAGAGTCGGAGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.398 | 0.389 | search_plus_done; http://172.18.8.135:50400/match?q=AAGGAGGAGAGAGTCGGAGG&k=0&no_gap=0&offset=0&limit=50
0.484 | 0.086 | search_minus_done; http://172.18.8.135:50400/match?q=CCTCCGACTCTCTCCTCCTT&k=0&no_gap=0&offset=0&limit=44
0.487 | 0.003 | cgi_end;

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