GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-17 12:05:46, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Cajanus cajan cultivar UPAS 120 contig23688.UPAS mRNA sequence.
EZ641405.1:707-726
ACCTTAGTTTGCTAGAGATTCAAAATGCTC707AAGGCCTAGCTGATGTATTGATGGAAATGCTTAGTGCCTTGAATCCGAAA
TSA: Cajanus cajan cultivar Asha contig31702.Asha mRNA sequence.
EZ679566.1:714-733
ACCTTAGTTTGCTAGAGATTCAAAATGCTC714AAGGCCTAGCTGATGTATTGATGGAAATGCTTAGTGCCTTGAATCCGAAA
Mesoplodon bidens genome assembly, chromosome: 7.
OZ071504.1:92751084-92751103
TGTATATATAAAAAAGATTCTCTATAGAAT92751084CAATACATCAGCTAGGCCTTGTTGAATTGCAAGTGACAGAAAACCCAACA
Mesoplodon bidens genome assembly, chromosome: 8.
OZ073220.1:90065519-90065538
TGTATATATAAAAAAGATTCTCTATAGAAT90065519CAATACATCAGCTAGGCCTTGTTGAATTGCAAGTGACAGAAAACCCAACA
TSA: Cajanus cajan cultivar Asha contig10382.Asha mRNA sequence.
EZ658246.1:327-346
TTTCGGATTCAAGGCACTAAGCATTTCCAT327CAATACATCAGCTAGGCCTTGAGC
Eudonia pallida genome assembly, chromosome: 1.
OZ204435.1:66809702-66809721
GCCACATCTTTAGATGTGTAATCATATCAA66809702CAATACATCAGCTAGGCCTTTTAATAATGAAATTATAATAACGAACATTG
Eudonia pallida genome assembly, chromosome: 1.
OZ204453.1:67293137-67293156
ATGCCACATCTTTAGATGTGTAATAATCAA67293137CAATACATCAGCTAGGCCTTTTAATAATGAAATTATAATAACGAACATTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAGGCCTAGCTGATGTATTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGGCCTAGCTGATGTATTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.251 | 0.241 | search_plus_done; http://172.18.8.135:50800/match?q=AAGGCCTAGCTGATGTATTG&k=0&no_gap=0&offset=0&limit=50
0.348 | 0.098 | search_minus_done; http://172.18.8.135:50800/match?q=CAATACATCAGCTAGGCCTT&k=0&no_gap=0&offset=0&limit=48
0.352 | 0.004 | cgi_end;

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