GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:14:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dianthus caryophyllus mRNA, clone: CES08F15, 5' end sequence.
FY385257.1:330-349
CGTCGATTTCGATGACGGAATGGAGAATTT330ACCGTACTTAGACCCGCCTTTGGTATGTTGCTTCGGCGCTGTGCACAAGG
Dianthus caryophyllus mRNA, clone: CES12E21, 5' end sequence.
FY386751.1:344-363
CGTCGATTTCGATGACGGAATGGAGAATTT344ACCGTACTTAGACCCGCCTTTGGTATGTTGCTTCGGCGCTGTGCACAAGG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.695.C1.
FX297987.1:414-433
CGTCGATTTCGATGACGGAATGGAGAATTT414ACCGTACTTAGACCCGCCTTTGGTATGTTGCTTCGGCGCTGTGCACAAGG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.695.C2.
FX297988.1:410-429
CGTCGATTTCGATGACGGAATGGAGAATTT410ACCGTACTTAGACCCGCCTTTGGTATGTTGCTTCGGCGCTGTGCACAAGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAGGCGGGTCTAAGTACGGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGGCGGGTCTAAGTACGGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.365 | 0.356 | search_plus_done; http://172.18.8.135:50400/match?q=AAGGCGGGTCTAAGTACGGT&k=0&no_gap=0&offset=0&limit=50
0.612 | 0.247 | search_minus_done; http://172.18.8.135:50400/match?q=ACCGTACTTAGACCCGCCTT&k=0&no_gap=0&offset=0&limit=50
0.616 | 0.003 | cgi_end;

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