GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:17:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Labrus bergylta genome assembly, chromosome: 23.
OZ005731.1:19463577-19463596
AAATTTGAAATGACAGTAGGAAACCTCCCT19463577AAGGGTGTCCCAACTGACTGCTGTGAAAATCTACATTTGTCAATTACGTG
TSA: Musa acuminata AAA Group Unigene93623_NK1 mRNA sequence.
JV426581.1:64-83
CTTATTCAAGAACTTCCAAAGTTTCGGTTG64AAGGGTGTCCCAACTGACTGCAGTGAATGTCCTATCTGCCTTGAAGAATT
Musa troglodytarum cultivar karat chromosome 1.
CP097502.1:24814445-24814464
CTTATTCAAGAACTTCCAAAGTTCCGGTTG24814445AAGGGTGTCCCAACTGACTGCAGTGAATGTCCTATCTGCCTTGAAGAATT
Caprimulgus europaeus genome assembly, chromosome: Z.
OU015527.1:41672874-41672893
AAGTGAGCAGAAGTGACCTTCGGACCAAAT41672874CAGTCAGTTGGGACACCCTTTACATTCAGTGAATTTCCTTTGGATGGATA
TSA: Musa acuminata AAA Group Unigene21063_B1 mRNA sequence.
JV331008.1:652-671
AATTCTTCAAGGCAGATAGGACATTCACTG652CAGTCAGTTGGGACACCCTTCAACCGAAACTTTGGAAGTTCTTGAATAAG
Musa acuminata subsp. malaccensis isolate AA chromosome 1.
CP126370.1:18184728-18184747
AATTCTTCAAGGCAGATAGGACATTCACTG18184728CAGTCAGTTGGGACACCCTTCAACCGAAACTTTGGAAGTTCTTGAATAAG
Musa acuminata subsp. malaccensis isolate AA chromosome 12.
CP126381.1:18383328-18383347
AATTCTTCAAGGCAGATAGGACATTCACTG18383328CAGTCAGTTGGGACACCCTTCAACCGAAACTTTGGAAGTTCTTGAATAAG
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A01.
HG996466.1:10347550-10347569
AATTCTTCAAGGCAGATAGGACATTCACTG10347550CAGTCAGTTGGGACACCCTTCAACCGAAACTTTGGAAGTTCTTGAATAAG
Musa schizocarpa genome assembly, chromosome: S01.
LS990915.1:11185565-11185584
AATTCTTCAAGGCAGATAGGACATTCACTG11185565CAGTCAGTTGGGACACCCTTCAACCGAAACTTTGGAAGTTCTTGAATAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAGGGTGTCCCAACTGACTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGGGTGTCCCAACTGACTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.116 | 0.107 | search_plus_done; http://172.18.8.135:50400/match?q=AAGGGTGTCCCAACTGACTG&k=0&no_gap=0&offset=0&limit=50
0.166 | 0.050 | search_minus_done; http://172.18.8.135:50400/match?q=CAGTCAGTTGGGACACCCTT&k=0&no_gap=0&offset=0&limit=47
0.170 | 0.004 | cgi_end;

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