GGGenome | Results

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2025-03-18 08:03:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Trifolium repens mRNA, clone: WCC39k05_077, unspecified EST.
FY467967.1:21-40

CTACAATGTATCGCGTTCTT21CACCGCACCTTCTGTACCTTCGCAGAAGAATCAACCGCCGCCACCGCCGC

Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:45809673-45809692

AAAAAGCACACTACAATGTATCGCGTTCTT45809673CACCGCACCTTCTGTACCTTCGCAGAAGAATCAACCGCCGCCACCGCCAC

Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:42585782-42585801

AAAAAGCACACTACAATGTATCGCGTTCTT42585782CACCGCACCTTCTGTACCTTCGCAGAAGAATCAACCACCGCCGCCGCCAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.119 | 0.111 | search_plus_done; http://172.18.8.135:50400/match?q=AAGGTACAGAAGGTGCGGTG&k=0&no_gap=0&offset=0&limit=50
0.231 | 0.112 | search_minus_done; http://172.18.8.135:50400/match?q=CACCGCACCTTCTGTACCTT&k=0&no_gap=0&offset=0&limit=50
0.234 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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