GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 11:53:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Conger conger genome assembly, chromosome: 15.
OY741328.1:17596820-17596840
CCTAATCTGGTCTGTTCAACACCTCCGTAC17596820AAGTACCTCTGCAGCAACAGCTGCCTCTGCAGTATATGACATAATAATATG
Solanum melongena mRNA, clone: SmFL06I06, 5'end.
FS070505.1:335-355
ACCTGAAAGCTCTACTGGAAGTTGAGACAC335AAGTACCTCTGCAGCAACAGCAGCTGCTGTACAATGGGAGGGAAATGAGGA
Solanum melongena mRNA, clone: SmFL15M08, 5'end.
FS076882.1:368-388
ACCTGAAAGCTCTACTGGAAGTTGAGACAC368AAGTACCTCTGCAGCAACAGCAGCTGCTGTACAATGGGAGGGAAATGAGGA
Solanum torvum mRNA, clone: TVR19J02, 5'end, expressed in root at vegetative stage, 2 months after germination.
FS115785.1:426-446
ACCTGAAAGCTCTACTGGAAGTTGAGACAC426AAGTACCTCTGCAGCAACAGCAGCTTCTGTACAATGGGAGGGAAATGAGGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAGTACCTCTGCAGCAACAGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGTACCTCTGCAGCAACAGC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.354 | 0.345 | search_plus_done; http://172.18.8.135:50400/match?q=AAGTACCTCTGCAGCAACAGC&k=0&no_gap=0&offset=0&limit=50
0.383 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=GCTGTTGCTGCAGAGGTACTT&k=0&no_gap=0&offset=0&limit=46
0.383 | 0.000 | cgi_end;

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