GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 18:59:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Echiichthys vipera genome assembly, chromosome: 7.
OY829652.1:18328840-18328859
AGTGAAGCATTGTTTTTCAGACTGGCATTG18328840AAGCAGCACTCCATCGACTTTACACTTGAAGTCGACTACTTAGTCTATGA
KS23069H08 KS23 Capsicum annuum cDNA, mRNA sequence.
GD117393.1:207-226
ATATATATAAGAGGGAGTTGGGGGTTAAGC207AAGCAGCACTCCATCGACTTCTCTGCTTCATCAATAGGGGTATTTTTGTC
TSA: Capsicum annuum MGMT_Contig14966, mRNA sequence.
JW065210.1:174-193
ATATATATAAGAGGGAGTTGGGGGTTAAGC174AAGCAGCACTCCATCGACTTCTCTGCTTCATCAATAGGGGTATTTTTGTC
Capsicum annuum Takanotsume DNA, chromosome 1, sequence.
AP026696.1:257776675-257776694
ATATATATAAGAGGGAGTTGGGGGTTAAGC257776675AAGCAGCACTCCATCGACTTCTCTGCTTCATCAATAGGGGTATTTTTGTC
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 1.
CP124731.1:257696806-257696825
ATATATATAAGAGGGAGTTGGGGGTTAAGC257696806AAGCAGCACTCCATCGACTTCTCTGCTTCATCAATAGGGGTATTTTTGTC
Eristalinus aeneus genome assembly, chromosome: 1.
OY019130.1:73299010-73299029
ACCAAGCTCTGACGATTTCGTGGACGATTT73299010AAGCAGCACTCCATCGACTTGCGCGAACATATCATTACGGTTTGCACTCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AAGTCGATGGAGTGCTGCTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGTCGATGGAGTGCTGCTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.091 | 0.083 | search_plus_done; http://172.18.8.135:50400/match?q=AAGTCGATGGAGTGCTGCTT&k=0&no_gap=0&offset=0&limit=50
0.217 | 0.126 | search_minus_done; http://172.18.8.135:50400/match?q=AAGCAGCACTCCATCGACTT&k=0&no_gap=0&offset=0&limit=50
0.222 | 0.004 | cgi_end;

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