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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-12-17 09:52:59, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

EST1101924 Dulce mature fruit library Cucumis melo cDNA clone FR13H4, mRNA sequence.
DV633328.1:492-510
GTACTTGTTAAACGTATTATGATCAATATT492AAGTTGGTATGATGTTGTGTTTTGATTTTGTTAATAATGTGGTGATTGG
EST1101925 Dulce mature fruit library Cucumis melo cDNA clone FR13H5, mRNA sequence.
DV633329.1:492-510
GTACTTGTTAAACGTATTATGATCAATATT492AAGTTGGTATGATGTTGTGTTTTGATTTTGTTAATAATGTGGTGATTGG
EST1102975 Tam Dew mature fruit library Cucumis melo cDNA clone FR16K24, mRNA sequence.
DV634379.1:426-444
GTACTTGTTAAACGTATTATGATCAATATT426AAGTTGGTATGATGTTGTGTTTTGATTTTGTTAATAATGTGGTGATTGG
EST11045149 PFLP2 library Cucumis melo cDNA clone DA5YG21FM1, mRNA sequence.
JG503436.1:510-528
GTACTTGTTAAACGTATTATGATCAATATT510AAGTTGGTATGATGTTGTGTTTTGATTTTGTTAATAATGTGGTGATTGG
CsB10STC_Bam_66M19F_814 ends of BAC library of B10 line of Cucumis sativus L. (BamHI) Cucumis sativus genomic, genomic survey sequence.
GS863768.1:195-213
GTACTTGTTAAACGTATTATGAATATTATT195AAGTTGGTATGATGTTGTGTTTTGATTTTGTTAATAATGTGGTTATTAA
Cucumis melo genomic scaffold, anchoredscaffold00068.
LN681876.1:895687-895705
GTACTTGTTAAACGTATTATGATCAATATT895687AAGTTGGTATGATGTTGTGTTTTGATTTTGTTAATAATGTGGTGATTGG
Lathyrus aphaca genome assembly, chromosome: 2.
OZ014520.1:270113585-270113603
ATTCATCAGAGGAATGAGAAACAAAGGGGG270113585AAGTTGGTATGATGTTGTGCTCCTTTGTTTTACATCTGGATGCTCAGAC
Lathyrus aphaca genome assembly, chromosome: 4.
OZ014522.1:336067216-336067234
ATTCATCAGAGGAATGAGAAACAAAGGGGG336067216AAGTTGGTATGATGTTGTGCTCCTTTGTTTTACTCCTGGCTGCTCAGAC
Lathyrus aphaca genome assembly, chromosome: 5.
OZ014523.1:114083930-114083948
ATTCATCAGAGGAATGAGAAACAAAGGGGA114083930AAGTTGGTATGATGTTGTGCTCCTTTGTTTTACACCTGGCTGCTCAGAC
Lathyrus aphaca genome assembly, chromosome: 5.
OZ014523.1:408859654-408859672
ATCTATCAGAGGAATGAGAAACAAAGGGGG408859654AAGTTGGTATGATGTTGTGCTCCTTTGTTTTACACCTGGCTTCTCAGAC
Lathyrus aphaca genome assembly, chromosome: 5.
OZ014523.1:493321183-493321201
ATTCATCAGAGGAATGAGAAACAAAGGGGG493321183AAGTTGGTATGATGTTGTGCTCCTTTGTTTTACACCTGGCTGCTCAGAC
Lathyrus aphaca genome assembly, chromosome: 7.
OZ014525.1:350731798-350731816
ACCTGGATGCAAATCTTTGGGAGCGACAGG350731798AAGTTGGTATGATGTTGTGCCCCTTTGTTTTACACTTGGTTGCTTAGAC
Adonis annua genome assembly, chromosome: 12.
OZ123187.1:675563355-675563373
TTTGTAAGTGATGGTAGAGGAGGTTATTTG675563355AAGTTGGTATGATGTTGTGAATGCACTTCCATAAAAAAGTTGAAGGATG
Mesocentrotus franciscanus isolate Mf1 chromosome 4.
CP137669.1:9789037-9789055
GTCGTAGAACGTCGTATTGTCGCTGATGAA9789037AAGTTGGTATGATGTTGTGATGGTCTTACCTGATGTAACCGTTACCATC
Sthenelais limicola genome assembly, chromosome: 3.
OW804096.1:124626560-124626578
ATTGGTGTCCTTGGAATAATTCATAGCGGA124626560AAGTTGGTATGATGTTGTGATGTGGTGCGTAGTGAGTAAAGTGGTTCAA
Anopheles funestus genome assembly, chromosome: 3.
OX030924.1:42616214-42616232
TTGACATACCAGGTTGGAAGCCAAACTGTG42616214AAGTTGGTATGATGTTGTGTACTTCTGTGTGATGGTAGATGCGTTTAGT
Dysidea avara genome assembly, chromosome: 8.
OY787653.2:9081691-9081709
TGAGTTCCATTCTTGTACTGTTGTGGAAGA9081691AAGTTGGTATGATGTTGTGGATATTGTTGGAAGTATGAAGTGATATTGC
Dysidea avara genome assembly, chromosome: 8.
OY787653.2:9224106-9224124
TGAGTTCCATTCTTGTACTGTTGTGGAAGA9224106AAGTTGGTATGATGTTGTGGATATTGTTGGAAGTATGAAGTGATATTGC
Anopheles funestus genome assembly, chromosome: 2RL.
OZ035534.1:34921133-34921151
TTGACATACCAGGTTGGAAGCCAAACTGTG34921133AAGTTGGTATGATGTTGTGTACTTCTGTGTGATGGTAGATGCGTTTAGT
Anopheles funestus genome assembly, chromosome: 2RL.
OZ035534.1:54339842-54339860
TTGACATACCAGGTTGGAAGCCAAACTGTG54339842AAGTTGGTATGATGTTGTGTACTTCTGTGTGATGGTAGATGCGTTTAGT
Anopheles funestus genome assembly, chromosome: 2RL.
OZ035534.1:61009504-61009522
TTGACATACCAGGTTGGAAGCCAAACTGTG61009504AAGTTGGTATGATGTTGTGTACTTCTGTGTGATGGTAGATGCGTTTAGT
Anopheles funestus genome assembly, chromosome: 3RL.
OZ035535.1:16943760-16943778
TTGACATACCAGGTTGGAAGCCAAACTGCG16943760AAGTTGGTATGATGTTGTGTACTTCTGTGTGATGGTAGATGCGTTTAGT
Triaxomera parasitella genome assembly, chromosome: 2.
OZ210324.1:4174343-4174361
GGTACATACATTTTGGTTTTTAATTTTGCT4174343AAGTTGGTATGATGTTGTGTCAATTTATCGCAATACGGAGTTATTACTA
Millepora complanata genome assembly, chromosome: 3.
OZ210620.1:148731678-148731696
AGGTGACATAAGCTTAGCTAAATATTTTGC148731678AAGTTGGTATGATGTTGTGTTAATGTTGGAGATAATAGGTCGTATTGGT
Millepora alcicornis genome assembly, chromosome: 3.
OZ218836.1:153791077-153791095
AGGTGACATAAGCTTAGCTAAATATTTTGC153791077AAGTTGGTATGATGTTGTGTTAATGTTGGAGATAATAGGTCGTATTGGT
Millepora alcicornis genome assembly, chromosome: 14.
OZ218847.1:145875026-145875044
AGGTGACAAAAGCTTCGCTAAATATTTTGC145875026AAGTTGGTATGATGTTGTGTTAATGTTGGAGATAATAGGTCGTATTGGT
Anas platyrhynchos genome assembly, chromosome: 22.
LS423632.1:666310-666328
TATCATTCTTGGGTCTTAAATTGTTCAAAT666310AAGTTGGTATGATGTTGTGAAGGTCTTGGTGTAATATGAGCTGTTTGTC
Anas platyrhynchos genome assembly, chromosome: 22.
OZ076998.1:760630-760648
TATCATTCTTGGGTCTTAAATTGTTCAAAT760630AAGTTGGTATGATGTTGTGAAGGTCTTGGTGTAATATGAGCTGTTTGTC
Cucumis melo isolate PI 511890 chromosome 8.
CP136107.1:8885675-8885693
CCAATCACCACATTATTAACAAAATCAAAA8885675CACAACATCATACCAACTTAATATTGATCATAATACGTTTAACAAGTAC
Cucumis melo genomic chromosome, chr_8.
LN713262.1:8285399-8285417
CCAATCACCACATTATTAACAAAATCAAAA8285399CACAACATCATACCAACTTAATATTGATCATAATACGTTTAACAAGTAC
Polygonum maritimum genome assembly, chromosome: 1.
OZ002728.1:22423574-22423592
TTAAGCCTATCATCATATCGACAATCAATA22423574CACAACATCATACCAACTTGTTAATGTCGGGTCTAAGAGAACCCACAAT
Lathyrus aphaca genome assembly, chromosome: 3.
OZ014521.1:377929352-377929370
GTCTGAGAAACCAGGTGTAAAACGAAGGAG377929352CACAACATCATACCAACTTCCCCCTCTCTTTCTCATTCCTCTGATGGAT
Lathyrus aphaca genome assembly, chromosome: 3.
OZ014521.1:379191725-379191743
GTCTGAGCAGCCAGGTGTGAAACAAAGGAG379191725CACAACATCATACCAACTTCCCCCTTTGTTTCTCATTTCTCTGATGAAT
Lathyrus aphaca genome assembly, chromosome: 5.
OZ014523.1:380912598-380912616
GTCTGAGCAGCCAGGTGTAGAACAGAGGAG380912598CACAACATCATACCAACTTCCCCCTCTGTTTTTCATTCCTCTGATGAAT
Melolontha melolontha genome assembly, chromosome: 3.
OW285237.1:18847024-18847042
TTTCTCAAGCACTAGTTCTGCGCCTACTTA18847024CACAACATCATACCAACTTGACTTACCAACTTGCCCAAACAACACGATT
Anopheles funestus genome assembly, chromosome: 2.
OX030923.1:62977411-62977429
ACTAAACGCATCTACCATCACACAGAAGTA62977411CACAACATCATACCAACTTCGCAGTTTGGCTTCCAACCTGGTATGTCAA
Anopheles funestus genome assembly, chromosome: 3.
OX030924.1:41583391-41583409
ACTAAACGCATCTACCATCACACAGAAGTA41583391CACAACATCATACCAACTTCACAGTTTGGCTTCCAACCTGGTATGTCAA
Anopheles funestus genome assembly, chromosome: 3.
OX030924.1:44602696-44602714
ACTAAACGAATCTACCATCACACAGAAGTA44602696CACAACATCATACCAACTTCACAGTTTGGCTTCCAACCTGGTATGTCAA
Anopheles funestus genome assembly, chromosome: X.
OX030925.1:20469240-20469258
ACTAAACGCATCTACCATCACACAGAAGTA20469240CACAACATCATACCAACTTCACAGTTTGGCTTCCAACCTGGTATGTCAA
Anopheles funestus genome assembly, chromosome: X.
OX030925.1:21737495-21737513
ACTAAACGCATCTACCATCACACAGAAGTA21737495CACAACATCATACCAACTTCACAGTTTGGCTTCCAACCTGGTATGTCAA
Agrochola lota genome assembly, chromosome: 16.
OX376234.1:19645067-19645085
GTAGTTCGCAAGTGGCGATGTAGATGCCGC19645067CACAACATCATACCAACTTACTCCTTTTGCTTCATTAATTCTGGGCATC
Eledone cirrhosa genome assembly, chromosome: 1.
OZ024740.1:124097614-124097632
CTCTAAACTATAGTCGACTGTAACACATTT124097614CACAACATCATACCAACTTGTAGTTTCCTTGTAACATAAAATATTAAAG
Anopheles funestus genome assembly, chromosome: 2RL.
OZ035534.1:9155837-9155855
ACTAAACGCATCTACCATCACACAGAAGTA9155837CACAACATCATACCAACTTCACAGTTTGGCTTCCAACCTGGTATGTCAA
Anopheles funestus genome assembly, chromosome: 3RL.
OZ035535.1:44753595-44753613
ACTAAACGAATCTACCATCACACAGAAGTA44753595CACAACATCATACCAACTTCACAGTTTGGCTTCCAACCTGGTATGTCAA
Anopheles funestus genome assembly, chromosome: X.
OZ035536.1:21549188-21549206
ACTAAACGCATCTACCATCACACTGAAGCA21549188CACAACATCATACCAACTTCACAGTTTGGCTTCCAACCTGGTATGTCAA
Aspilapteryx tringipennella genome assembly, chromosome: 21.
OZ076581.1:5893946-5893964
TATCCGTGTAACCGTATTCAATAATAAAAA5893946CACAACATCATACCAACTTTCGCTCTGAACGTGAATCGAACTCTGGGGC
Pyrgus carlinae genome assembly, chromosome: 21.
OZ194702.1:886649-886667
AGAAAACTACAATTTCTAATACTTGAACAA886649CACAACATCATACCAACTTACACGAGAAAATCTCAATAAAGGCATCAAA
Bitoma crenata genome assembly, chromosome: 3.
OZ210532.1:14842614-14842632
TAGTTTTAGATGTTCATAAATTAGAAATTA14842614CACAACATCATACCAACTTTTAAAGATTCTTCCCAAAATATATTTTTAT
Millepora dichotoma genome assembly, chromosome: 2.
OZ218603.1:132961425-132961443
TGATCTATGACCTATTATCTCCAACATTAA132961425CACAACATCATACCAACTTGCAAAATACTTAGCTAAGCTTTTGTCACCT
Geotrypetes seraphini genome assembly, chromosome: 2.
LR699147.1:374808433-374808451
TGAATACAATTAAAGCAGCTTCCATCACTC374808433CACAACATCATACCAACTTACCACCTCTACCTCAAAGAATAAAACAGCC
Symphodus melops genome assembly, chromosome: 17.
OX393541.1:2519534-2519552
AGAGCGTAAGAGAGATTTGTCACCTATTTT2519534CACAACATCATACCAACTTTACAGCACAAAATAAGGGTATGCAACAGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AAGTTGGTATGATGTTGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AAGTTGGTATGATGTTGTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.505 | 0.496 | search_plus_done; http://172.18.8.135:50800/match?q=AAGTTGGTATGATGTTGTG&k=0&no_gap=0&offset=0&limit=50
0.636 | 0.131 | search_minus_done; http://172.18.8.135:50800/match?q=CACAACATCATACCAACTT&k=0&no_gap=0&offset=0&limit=22
0.652 | 0.015 | cgi_end;

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