GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 13:05:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Populus tremuloides microsatellite PTR12.
AF240760.1:228-252
AGTAAGCGACACCAGAGGAAGCATTATAAC228AATAACCATCCCTCCAATAACCTACCATAAGAAATCAAAATCAGTACTTTTTATT
P_tremula-Br11-PTR12_r.ab1 P_tremula-Br11 Populus tremula genomic clone P_tremula-Br11-PTR12, genomic survey sequence.
JS807662.1:190-214
AATAAAAAGTACTGATTTTGATTTCTTATG190GTAGGTTATTGGAGGGATGGTTATTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AATAACCATCCCTCCAATAACCTAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AATAACCATCCCTCCAATAACCTAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.096 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=AATAACCATCCCTCCAATAACCTAC&k=0&no_gap=0&offset=0&limit=50
0.150 | 0.054 | search_minus_done; http://172.18.8.135:50400/match?q=GTAGGTTATTGGAGGGATGGTTATT&k=0&no_gap=0&offset=0&limit=49
0.151 | 0.001 | cgi_end;

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