GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 17:31:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Astatotilapia calliptera genome assembly, chromosome: 12.
LS420030.2:34660905-34660924
AGCAGAGTCCCAAAAACCAACCAACCAAGA34660905AATAGACCGGTAAAACTTGCTCTCAGGTTCAAAGAGATGAATGCTAACCA
Brassica rapa genome, scaffold: A03.
LR031572.1:9173004-9173023
TTGCACATGACTTCTATTTTAATAGTATAG9173004AATAGACCGGTAAAACTTGCGAACCGATTATTTAGGGATGGTACTGTTCA
Brassica rapa genome assembly, chromosome: A03.
LS974619.2:9295476-9295495
TTGCACATGACTTCTATTTTAATAGTATAG9295476AATAGACCGGTAAAACTTGCGAACCGATTATTTAGGGATGGTACTGTTCA
Ligdia adustata genome assembly, chromosome: 2.
OX346215.1:15087358-15087377
AATATGCATGTCCCTTCCAAATATTACTAA15087358AATAGACCGGTAAAACTTGCACAGTTTATGGAAGAATTACGCAACCATTA
Neolamprologus multifasciatus genome assembly, chromosome: 12.
OY755025.1:3296767-3296786
TGGTTAGCATTCATCTCTTTGAACCTGAGA3296767GCAAGTTTTACCGGTCTATTTCTCGGTTGGTTGGTTTTTGGGACTCTGCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AATAGACCGGTAAAACTTGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AATAGACCGGTAAAACTTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.119 | 0.110 | search_plus_done; http://172.18.8.135:50400/match?q=AATAGACCGGTAAAACTTGC&k=0&no_gap=0&offset=0&limit=50
0.154 | 0.036 | search_minus_done; http://172.18.8.135:50400/match?q=GCAAGTTTTACCGGTCTATT&k=0&no_gap=0&offset=0&limit=46
0.155 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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