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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-17 10:16:03, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Rangifer tarandus platyrhyncus genome assembly, chromosome: 19.
OX596103.1:57038590-57038609
GTGTCGGCGCCTAGGGAACAAGATGAAGGG57038590AATAGGTTCCAGAATGAAGCTATGGTATAGACTGCTGATTGCCCCTAATT
TSA: Cajanus cajan cultivar Asha contig10382.Asha mRNA sequence.
EZ658246.1:207-226
CCTATACTTTCATAAACAAGAAAAACTGAA207AATAGGTTCCAGAATGAAGCCAGCAGAAAAGGAACGAGATGATGATGATG
Rangifer tarandus platyrhyncus genome assembly, chromosome: 18.
OX459954.2:6799267-6799286
AATTAGGGGCAATCAGCAGTCTATACCATA6799267GCTTCATTCTGGAACCTATTCCCTTCATCTTGTTCCCTAGGCGCCGACAC
Ceratothoa steindachneri genome assembly, chromosome: 9.
OZ018325.1:71379739-71379758
TATAGGATTCACATAATACTCATTAGTGAG71379739GCTTCATTCTGGAACCTATTCCGCCTTGCAATGCACTTTTGTCATATTAT
Salmo trutta genome assembly, chromosome: 31.
LR584423.1:39397023-39397042
CAGGATCTGGCACCTGCCAGTTTTAGGACT39397023GCTTCATTCTGGAACCTATTTGACAGGATGTAATGTTTGCAATGTAAACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AATAGGTTCCAGAATGAAGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AATAGGTTCCAGAATGAAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.320 | 0.311 | search_plus_done; http://172.18.8.135:50800/match?q=AATAGGTTCCAGAATGAAGC&k=0&no_gap=0&offset=0&limit=50
0.462 | 0.142 | search_minus_done; http://172.18.8.135:50800/match?q=GCTTCATTCTGGAACCTATT&k=0&no_gap=0&offset=0&limit=48
0.464 | 0.002 | cgi_end;

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