GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-12-17 07:37:40, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

MEUAP66TR JCVI-MT2 Medicago truncatula cDNA 3', mRNA sequence.
GE350502.1:640-659
GTAAACAAGTGTGCCGCATACCAACGCAAT640AATCGCTTTCCCAATTTCAATTCTTTTTCTTTCAACAACAACTACCTCGC
TSA: Medicago truncatula Contig14848.Metrroot mRNA sequence.
JR369846.1:364-383
GTAAACAAGTGTGCCGCATACCAACGCAAT364AATCGCTTTCCCAATTTCAATTCTTTTTCTTTCAACAACAACTACCTCGC
Hibiscus richardsonii genome assembly, chromosome: 4.
OZ174205.1:19677823-19677842
TTGATGTACGCATTCAATTCGATCTCCATT19677823AATCGCTTTCCCAATTTCAATTTCAATTATTTTGTTACCCCCGCCCCTGT
Taphrorychus bicolor genome assembly, chromosome: 9.
OX638305.1:4465589-4465608
TACTTCTATAAGTTCTGTTTGGCCTTTTGA4465589AATCGCTTTCCCAATTTCAATATTAGTTTTGAGTCCATATACCATGTTGC
Leptopterna dolabrata genome assembly, chromosome: 5.
OX940979.1:11331604-11331623
TACCTATTTTTTGTTCGCAAGTTTAACAAA11331604AATCGCTTTCCCAATTTCAAACATAGAACTCCATTTATTCTGATACTTTT
Calliphora vicina genome assembly, chromosome: 5.
OY288236.1:12733111-12733130
GTTTTCAAAAAAGTACTTTTTGTTAAAATT12733111AATCGCTTTCCCAATTTCAAGCGTTTTTTGACATTTTCATAGTTTTTAAA
Sepia esculenta genome assembly, chromosome: 5.
OZ038479.1:72386676-72386695
CCCCCACAGTAACGCAGAGCACAGCTGAAA72386676AATCGCTTTCCCAATTTCAATATAGTTTTCCATTTTTCTTACAAAATTTC
Euchloe belemia genome assembly, chromosome: 16.
OZ203438.1:10790428-10790447
GGGTTTTAATTACAAAATAATTATTTTTGC10790428AATCGCTTTCCCAATTTCAATCCTTATACTCTCGCAAGTCATTAAAAGTC
Euchloe belemia genome assembly, chromosome: 16.
OZ203469.1:10766834-10766853
GGGTTTTAATTACAAAATAATTATTTTTGC10766834AATCGCTTTCCCAATTTCAATCCTTATACTCTCGCAAGTCATTAAAAGTC
Euchloe insularis genome assembly, chromosome: 17.
OZ208625.1:10105961-10105980
TAGGGTTTAATTATAAAATAATTATTTGGC10105961AATCGCTTTCCCAATTTCAATCCTACTTATATACACTCGCAAGTCGTTGA
Anthocharis euphenoides genome assembly, chromosome: 17.
OZ219292.1:10398264-10398283
AGGTTTTAATTATAAAATAATTATTTTGCC10398264AATCGCTTTCCCAATTTCAATCCTACTTATACACTTGCAGGTCGTTGAAA
Medicago truncatula EST, clone mtgmadc120010a02.
AJ501651.1:64-83
GCGAGGTAGTTGTTGTTGAAAGAAAAAGAA64TTGAAATTGGGAAAGCGATTATTGCGTTGGTATGCGGCACACTTGTTTAC
Medicago truncatula EST MtBB31E09F1 : T3 end of clone MtBB31E09 of cDNA library MtBB from symbiotic root nodules of cultivar Jemalong of Medicago truncatula (barrel medic).
AL377430.1:179-198
GCGAGGTAGTTGTTGTTGAAAGAAAAAGAA179TTGAAATTGGGAAAGCGATTATTGCGTTGGTATGCGGCACACTTGTTTAC
EST318357 MHAM Medicago truncatula/Glomus versiforme mixed EST library cDNA clone pMHAM-55C2, mRNA sequence.
AW586734.1:149-168
GCGAGGTAGTTGTTGTTGAAAGAAAAAGAA149TTGAAATTGGGAAAGCGATTATTGCGTTGGTATGCGGCACACTTGTTTAC
NF041D09EC1F1077 Elicited cell culture Medicago truncatula cDNA clone NF041D09EC 5', mRNA sequence.
BF648226.1:150-169
GCGAGGTAGTTGTTGTTGAAAGAAAAAGAA150TTGAAATTGGGAAAGCGATTATTGCGTTGGTATGCGGCACACTTGTTTAC
NF104E04LF1F1024 Developing leaf Medicago truncatula cDNA clone NF104E04LF 5', mRNA sequence.
BG452457.1:140-159
GCGAGGTAGTTGTTGTTGAAAGAAAAAGAA140TTGAAATTGGGAAAGCGATTATTGCGTTGGTATGCGGCACACTTGTTTAC
MTYCF76TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence.
EV255004.1:155-174
GCGAGGTAGTTGTTGTTGAAAGAAAAAGAA155TTGAAATTGGGAAAGCGATTATTGCGTTGGTATGCGGCACACTTGTTTAC
MEUAP66TF JCVI-MT2 Medicago truncatula cDNA 5', mRNA sequence.
GE345565.1:150-169
GCGAGGTAGTTGTTGTTGAAAGAAAAAGAA150TTGAAATTGGGAAAGCGATTATTGCGTTGGTATGCGGCACACTTGTTTAC
Medicago truncatula clone MTYFL_FM_FN_FO1G-E-5 unknown mRNA.
BT052852.1:155-174
GCGAGGTAGTTGTTGTTGAAAGAAAAAGAA155TTGAAATTGGGAAAGCGATTATTGCGTTGGTATGCGGCACACTTGTTTAC
Medicago truncatula clone JCVI-FLMt-6L17 unknown mRNA.
BT142562.1:150-169
GCGAGGTAGTTGTTGTTGAAAGAAAAAGAA150TTGAAATTGGGAAAGCGATTATTGCGTTGGTATGCGGCACACTTGTTTAC
Hibiscus tridactylites genome assembly, chromosome: 6.
OY288270.1:88071518-88071537
ACAGGGGCGGGGGTAACAAAAGAATTGAAA88071518TTGAAATTGGGAAAGCGATTAATGGAGATCGAATTGAATACGTACATCAA
Gilliamella sp. ESL0443 chromosome, complete genome.
CP048263.1:131022-131041
GGCGGCTATCATAATTAATTTGCTTTAAAT131022TTGAAATTGGGAAAGCGATTTCTATTAAGTGAATAGAATTTCAATGATCA
Anthocharis cardamines genome assembly, chromosome: 16.
FR989966.1:1438871-1438890
GCTAGCCCGGTTGCAAGTGTATAAGTAGGA1438871TTGAAATTGGGAAAGCGATTGGCAAAATAATTATTTTATAATTAAAACCT
Lochmaea crataegi genome assembly, chromosome: 11.
OX387433.1:26043605-26043624
ATGCGGTGTTGGAGTTTGAGGTTAAGTATT26043605TTGAAATTGGGAAAGCGATTCAAGTTTATCCATAATTAAATGAAAACACA
Euchloe simplonia genome assembly, chromosome: 16.
OZ183899.1:1877257-1877276
TTTCAACGACTTGCGAGTGTATAAGTAGGA1877257TTGAAATTGGGAAAGCGATTGCCAAAATAATTATTTTATAATTAAAACCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/AATCGCTTTCCCAATTTCAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : AATCGCTTTCCCAATTTCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.246 | 0.237 | search_plus_done; http://172.18.8.135:50800/match?q=AATCGCTTTCCCAATTTCAA&k=0&no_gap=0&offset=0&limit=50
0.487 | 0.241 | search_minus_done; http://172.18.8.135:50800/match?q=TTGAAATTGGGAAAGCGATT&k=0&no_gap=0&offset=0&limit=39
0.496 | 0.009 | cgi_end;

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