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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-15 16:24:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium repens isolate ACLI19 chromosome 05_Pall.
CP125845.1:51978906-51978925
GGAAAGGGCGGTGGTGATCGGCGACGTTAT51978906AATCGGCAGTGATTTCAAGGGCGGAAGGTGGAGGCGATTGAGAATCGTAT
Streptosporangium sp. NBC_01810 chromosome, complete genome.
CP109070.1:1705857-1705876
GCTGGGGGTCGATGTGCGGTGGCTACGAAG1705857AATCGGCAGTGATTTCAAGGCTCGGCAGCACATCGACGCGTACGCTCTCA
Trifolium repens mRNA, clone: WCC32k03_045, unspecified EST.
FY465442.1:432-451
ATACGATTCTCAATCGCCTCCACCTTCCGC432CCTTGAAATCACTGCCGATTATAACGTCGCCGATCACCGCCGCCCTTTCC
Medicago arabica genome assembly, chromosome: 7.
OX326970.1:9632963-9632982
ACTTCAGGATTTCGATTCCTCGTCTTCCGC9632963CCTTGAAATCACTGCCGATTATCCCGCCGCCGATCAACGTCCTTTCCAAA
Streptosporangium sp. NBC_01755 chromosome, complete genome.
CP109131.1:492890-492909
TGAGAGCGTACGCGTCGATGTGCTGCCGAG492890CCTTGAAATCACTGCCGATTCTTCGTAGCCACCGCACATCGACCCCCAGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/AATCGGCAGTGATTTCAAGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : AATCGGCAGTGATTTCAAGG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.103 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=AATCGGCAGTGATTTCAAGG&k=0&no_gap=0&offset=0&limit=50
0.213 | 0.110 | search_minus_done; http://172.18.8.135:50400/match?q=CCTTGAAATCACTGCCGATT&k=0&no_gap=0&offset=0&limit=48
0.215 | 0.002 | cgi_end;

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